Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002919 Camellia sinensis var. sinensis HOM05D061769 ORTHO05D112610 1.9e-36 155.2 73 100.0
CSS0050015 Camellia sinensis var. sinensis HOM05D061769 ORTHO05D112924 6.8e-10 67.0 38 81.6
CSS0032647 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 3.4e-09 64.7 32 96.9
CSS0050468 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 4.4e-09 64.3 33 90.9
CSS0005568 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.7e-08 62.4 33 87.9
CSS0035375 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 3.7e-08 61.2 33 90.9
CSS0008048 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
CSS0035391 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
Lj2C305T3 Lonicera japonica HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 87.9
Oeu034145.1 Olea europaea HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
Oeu040106.1 Olea europaea HOM05D000309 ORTHO05D000271 8.3e-08 60.1 49 65.3
MSTRG.16245 Avicennia marina HOM05D000309 ORTHO05D000271 1.1e-07 59.7 33 87.9
Lsat_1_v5_gn_7_28400 Lactuca sativa HOM05D000309 ORTHO05D000271 1.1e-07 59.7 33 84.8
Lj2C304T10 Lonicera japonica HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 84.8
SGA_v2.0_scaffold333G48988 Striga asiatica HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 84.8
vmacro10961 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 87.9
HanXRQChr15g0480841 Helianthus annuus HOM05D000309 ORTHO05D000271 1.9e-07 58.9 33 78.8
Lj2C305T2 Lonicera japonica HOM05D000309 ORTHO05D000271 1.9e-07 58.9 33 81.8
MSTRG.7488 Avicennia marina HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 84.8
MSTRG.7490 Avicennia marina HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 84.8
Migut.M00452 Erythranthe guttata HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 81.8
Migut.M00906 Erythranthe guttata HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 81.8
Lj1C1189T4 Lonicera japonica HOM05D000309 ORTHO05D000271 4.1e-07 57.8 33 81.8
Dinv32251 Davidia involucrata HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Hma1.2p1_0020F.1_g013940 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Hma1.2p1_0286F.1_g114190 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Actinidia07696 Actinidia chinensis HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 81.8
Dinv32248 Davidia involucrata HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 81.8
HanXRQChr04g0117241 Helianthus annuus HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 84.8
Actinidia07697 Actinidia chinensis HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 75.8
HanXRQChr04g0114271 Helianthus annuus HOM05D000309 ORTHO05D000271 1.2e-06 56.2 32 81.2
Lsat_1_v5_gn_7_29000 Lactuca sativa HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 75.8
vmacro07273 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 81.8
CSS0005390 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 2.7e-06 55.1 36 72.2
Hma1.2p1_0286F.1_g114000 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 2.7e-06 55.1 35 80.0
SGA_v2.0_scaffold17G08108 Striga asiatica HOM05D000309 ORTHO05D000271 4.6e-06 54.3 33 78.8
ECA236G2534 Erigeron canadensis HOM05D000309 ORTHO05D000271 6.0e-06 53.9 33 75.8
ECA236G0186 Erigeron canadensis HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 75.8
Hma1.2p1_0286F.1_g114020 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 81.8
Lsat_1_v5_gn_7_34361 Lactuca sativa HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 78.8


User provided reference genes

Program Settings