Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002915 Camellia sinensis var. sinensis HOM05D008933 ORTHO05D011098 4.5e-52 207.6 103 100.0
CSS0025584 Camellia sinensis var. sinensis HOM05D008933 ORTHO05D011098 9.8e-39 163.3 103 84.5
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 1.2e-25 119.8 104 65.4
Hma1.2p1_0107F.1_g051450 Hydrangea macrophylla HOM05D008933 ORTHO05D011098 4.0e-24 114.8 98 65.3
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 3.8e-22 108.2 89 65.2
QL10p064621 Quercus lobata HOM05D008933 ORTHO05D011098 1.4e-21 106.3 90 63.3
QL10p065743 Quercus lobata HOM05D008933 ORTHO05D011098 1.4e-21 106.3 90 63.3
MBI10_g06899_MAGBIO Magnolia biondii HOM05D008933 ORTHO05D011098 2.4e-21 105.5 117 54.7
GSVIVG01038256001 Vitis vinifera HOM05D008933 ORTHO05D011098 4.2e-21 104.8 118 51.7
Potri.007G145600 Populus trichocarpa HOM05D008933 ORTHO05D011098 5.4e-21 104.4 101 56.4
FAN28G0262 Fragaria x ananassa HOM05D008933 ORTHO05D011098 2.1e-20 102.4 112 51.8
FAN23G1458 Fragaria x ananassa HOM05D008933 ORTHO05D011098 2.7e-20 102.1 120 51.7
FAN26G2154 Fragaria x ananassa HOM05D008933 ORTHO05D011098 2.7e-20 102.1 120 51.7
Prupe.7G270400 Prunus persica HOM05D008933 ORTHO05D011098 2.7e-20 102.1 109 56.0
PGSC0003DMG400037713 Solanum tuberosum HOM05D008933 ORTHO05D011098 3.5e-20 101.7 110 50.9
Cpa.g.sc151.11 Carica papaya HOM05D008933 ORTHO05D011098 6.0e-20 100.9 117 50.4
Manes.05G207500 Manihot esculenta HOM05D008933 ORTHO05D011098 6.0e-20 100.9 117 52.1
Aqoxy4G00007 Aquilegia oxysepala HOM05D008933 ORTHO05D011098 1.0e-19 100.1 86 64.0
TAR362G0848 Trochodendron aralioides HOM05D008933 ORTHO05D011098 1.0e-19 100.1 116 53.4
CiPaw.02G125300 Carya illinoinensis HOM05D008933 ORTHO05D011098 3.9e-19 98.2 90 57.8
Ciclev10024474m.g Citrus clementina HOM05D008933 ORTHO05D011098 1.5e-18 96.3 91 56.0
DCAR_027492 Daucus carota HOM05D008933 ORTHO05D011098 4.3e-18 94.7 105 50.5
Sopen12g008750 Solanum pennellii HOM05D008933 ORTHO05D011098 7.3e-18 94.0 108 50.0
SalBow3G0873 Salvia bowleyana HOM05D008933 ORTHO05D011098 1.6e-17 92.8 111 50.5
Haze_11124 Corylus avellana HOM05D008933 ORTHO05D011098 4.8e-17 91.3 86 55.8
Lsat_1_v5_gn_6_63300 Lactuca sativa HOM05D008933 ORTHO05D011098 6.2e-17 90.9 87 56.3
SEGI_15469 Sequoiadendron giganteum HOM05D008933 ORTHO05D011098 1.1e-16 90.1 106 50.9
ECA233G4707 Erigeron canadensis HOM05D008933 ORTHO05D011098 1.4e-16 89.7 119 47.1
Haze_11123 Corylus avellana HOM05D008933 ORTHO05D011098 1.5e-15 86.3 91 51.6
Migut.G00916 Erythranthe guttata HOM05D008933 ORTHO05D011098 5.8e-15 84.3 111 45.0
Haze_05801 Corylus avellana HOM05D008933 ORTHO05D011098 7.6e-15 84.0 117 45.3
Actinidia34563 Actinidia chinensis HOM05D008933 ORTHO05D011098 4.2e-13 78.2 47 83.0
ATR0743G210 Amborella trichopoda HOM05D008933 ORTHO05D011098 2.7e-12 75.5 78 50.0


User provided reference genes

Program Settings