Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002910 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 2.6e-152 542.0 268 100.0
CSS0018127 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.3e-146 523.1 268 96.3
CSS0005323 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 7.0e-145 517.3 268 96.3
CSS0002327 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 1.4e-113 413.3 281 79.4
CSS0020651 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-28 129.0 153 52.9
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-26 122.9 110 56.4
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-25 119.8 110 56.4
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 5.2e-23 112.5 104 53.8
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-22 109.8 105 54.3
CSS0016147 Camellia sinensis var. sinensis HOM05D002020 ORTHO05D002046 5.7e-22 109.0 107 56.1
CSS0019869 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 3.7e-21 106.3 80 65.0
CSS0027538 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 6.3e-21 105.5 84 61.9
CSS0045565 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D000004 1.2e-19 101.3 105 49.5
CSS0037613 Camellia sinensis var. sinensis HOM05D014708 ORTHO05D018827 5.0e-18 95.9 127 46.5
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 1.2e-14 84.7 105 45.7
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-14 84.3 105 45.7
CSS0046313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-14 84.0 85 50.6
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-14 83.2 98 46.9
CSS0021346 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-14 82.8 85 49.4
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.5e-14 82.0 92 45.7
CSS0030874 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-12 76.6 110 41.8
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 5.4e-12 75.9 108 36.1
CSS0011592 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-11 73.6 86 47.7
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-10 70.9 105 43.8
CSS0033927 Camellia sinensis var. sinensis HOM05D001352 ORTHO05D001354 2.3e-10 70.5 68 52.9
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 2.3e-10 70.5 105 35.2
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 3.9e-10 69.7 54 57.4
Oeu051347.1 Olea europaea HOM05D014708 ORTHO05D018827 6.6e-10 68.9 85 40.0
QL11p007130 Quercus lobata HOM05D003083 ORTHO05D003466 8.6e-10 68.6 95 37.9
CSS0036239 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-09 67.4 50 56.0
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-09 66.2 80 46.2
CSS0045250 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D008076 2.8e-08 63.5 60 53.3
Oeu024442.1 Olea europaea HOM05D000003 ORTHO05D000004 4.7e-08 62.8 105 33.3
Cpa.g.sc83.78 Carica papaya HOM05D000003 ORTHO05D000004 6.1e-08 62.4 108 33.3
QL06p026672 Quercus lobata HOM05D000324 ORTHO05D004875 6.1e-08 62.4 121 35.5
Cpa.g.sc2.104 Carica papaya HOM05D000003 ORTHO05D000004 8.0e-08 62.0 91 38.5
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 8.0e-08 62.0 105 32.4
QL11p036849 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-07 61.6 145 28.3
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 3.1e-07 60.1 104 32.7
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 3.1e-07 60.1 105 35.2
Hund22285 Selenicereus undatus HOM05D000003 ORTHO05D000004 4.0e-07 59.7 109 34.9
Hund23992 Selenicereus undatus HOM05D000003 ORTHO05D000004 4.0e-07 59.7 109 34.9
Oeu011316.1 Olea europaea HOM05D000003 ORTHO05D000004 6.8e-07 58.9 81 35.8
QL07p047387 Quercus lobata HOM05D002028 ORTHO05D002474 6.8e-07 58.9 106 32.1
Cpa.g.sc43.118 Carica papaya HOM05D004758 ORTHO05D006063 1.2e-06 58.2 105 33.3
CSS0034524 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 1.5e-06 57.8 86 37.2
Aqoxy4G01308 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 57.0 86 34.9
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 2.6e-06 57.0 98 33.7
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 2.6e-06 57.0 104 27.9
Oeu045954.1 Olea europaea HOM05D000003 ORTHO05D000004 3.4e-06 56.6 105 31.4
Hund23177 Selenicereus undatus HOM05D000003 ORTHO05D000004 3.4e-06 56.6 100 35.0
Hund04195 Selenicereus undatus HOM05D000877 ORTHO05D000004 4.4e-06 56.2 108 34.3
Aqoxy4G01530 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.8e-06 55.8 111 30.6
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.8e-06 55.8 100 35.0
Hund10471 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.8e-06 55.8 100 35.0
PGSC0003DMG400014038 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.8e-06 55.8 108 32.4
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.8e-06 55.8 107 35.5
Cpa.g.sc139.50 Carica papaya HOM05D000003 ORTHO05D000004 7.5e-06 55.5 106 32.1
QL10p000304 Quercus lobata HOM05D006645 ORTHO05D008129 7.5e-06 55.5 77 33.8
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-06 55.5 105 27.6
MBI17_g45042_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.8e-06 55.1 138 31.2


User provided reference genes

Program Settings