Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002904 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 1.3e-32 142.5 75 100.0
CSS0048379 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 7.7e-25 116.7 75 85.3
CSS0038042 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 1.7e-24 115.5 75 84.0
Rhsim07G0077900 Rhododendron simsii HOM05D000183 ORTHO05D000100 1.0e-13 79.7 79 60.8
vmacro13850 Vaccinium macrocarpon HOM05D000183 ORTHO05D000100 6.8e-13 77.0 79 59.5
Gohir.D12G241600 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.1e-07 59.7 77 54.5
Gorai.008G258900 Gossypium raimondii HOM05D000183 ORTHO05D000100 1.1e-07 59.7 77 54.5
Thecc.03G220800 Theobroma cacao HOM05D000183 ORTHO05D000100 1.5e-07 59.3 74 52.7
Duzib205G0556 Durio zibethinus HOM05D000183 ORTHO05D000100 1.9e-07 58.9 63 49.2
Peaxi162Scf00074g00025 Petunia axillaris HOM05D000183 ORTHO05D000100 3.2e-07 58.2 56 57.1
Gohir.A12G240300 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.2e-06 56.2 77 51.9
Cc08_g16780 Coffea canephora HOM05D000183 ORTHO05D000100 2.1e-06 55.5 62 50.0
Actinidia22208 Actinidia chinensis HOM05D000183 ORTHO05D000100 3.6e-06 54.7 76 50.0
Nitab4.5_0004251g0010 Nicotiana tabacum HOM05D000183 ORTHO05D000100 6.1e-06 53.9 65 47.7
Nitab4.5_0007001g0020 Nicotiana tabacum HOM05D000183 ORTHO05D000100 6.1e-06 53.9 65 47.7
COL.COLO4_10800 Corchorus olitorius HOM05D000183 ORTHO05D000100 8.0e-06 53.5 74 44.6


User provided reference genes

Program Settings