Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.2e-235 818.5 403 100.0
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 7.8e-233 810.1 400 99.5
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 5.7e-175 617.8 406 75.6
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 8.5e-171 604.0 409 74.3
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 8.8e-168 594.0 411 72.7
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.3e-158 563.5 403 68.7
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.1e-157 560.5 401 67.8
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 4.1e-157 558.5 401 66.8
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 9.2e-157 557.4 401 67.6
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 3.5e-156 555.4 400 67.5
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.7e-155 553.1 403 66.7
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 2.3e-155 552.7 400 65.8
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 2.3e-155 552.7 401 68.8
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 7.3e-154 547.7 408 66.7
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 3.6e-153 545.4 403 68.2
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.7e-153 545.0 400 66.5
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 5.2e-152 541.6 400 67.0
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 5.2e-152 541.6 404 67.1
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 6.4e-150 534.6 401 66.8
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.2e-148 530.4 401 63.3
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.6e-148 530.0 406 63.8
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.0e-148 529.6 401 63.3
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 5.9e-148 528.1 401 62.8
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 6.6e-147 524.6 407 62.7
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.9e-146 523.1 401 66.3
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 7.3e-146 521.2 401 66.1
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 9.5e-146 520.8 401 65.6
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 9.5e-146 520.8 408 64.7
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 9.5e-146 520.8 402 65.2
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.2e-145 520.4 424 62.0
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 1.2e-145 520.4 372 65.6
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 2.8e-145 519.2 369 66.4
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.8e-145 519.2 401 65.6
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 3.6e-145 518.8 408 62.7
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 3.6e-145 518.8 406 61.1
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 8.0e-145 517.7 395 62.0
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.0e-144 517.3 400 63.5
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 2.3e-144 516.2 400 63.0
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 3.1e-144 515.8 400 61.2
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 5.2e-144 515.0 400 62.2
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 5.2e-144 515.0 400 62.2
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 6.8e-144 514.6 407 64.4
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 6.8e-144 514.6 402 61.2
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 1.2e-143 513.8 338 70.1
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.5e-143 513.5 408 62.5
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.0e-143 513.1 396 61.9
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 2.6e-143 512.7 399 63.2
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 4.4e-143 511.9 406 61.6
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 2.2e-142 509.6 400 64.0
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.9e-142 509.2 407 62.2
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 3.7e-142 508.8 356 67.4
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 6.4e-142 508.1 333 70.0
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 8.3e-142 507.7 400 62.5
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.1e-141 507.3 401 62.1
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.4e-141 505.0 363 69.1
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 9.2e-141 504.2 400 61.0
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 2.7e-140 502.7 404 61.4
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 3.5e-140 502.3 394 60.2
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 1.3e-139 500.4 397 62.2
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 8.6e-139 497.7 404 60.6
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.1e-138 497.3 386 61.9
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.1e-138 497.3 429 59.4
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.5e-138 496.9 407 61.4
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 1.5e-138 496.9 328 71.0
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 1.9e-138 496.5 402 60.2
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 9.5e-138 494.2 400 60.5
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.6e-137 493.4 400 59.5
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 8.1e-137 491.1 408 60.5
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 8.9e-136 487.6 402 60.0
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 1.2e-135 487.3 414 58.7
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.5e-135 486.9 408 60.5
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 4.4e-135 485.3 357 65.8
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 4.4e-135 485.3 359 64.1
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 2.2e-134 483.0 326 68.7
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 2.2e-134 483.0 326 68.4
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 2.9e-134 482.6 402 60.9
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 3.7e-134 482.3 397 59.2
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 6.4e-134 481.5 413 58.8
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.9e-131 472.2 398 59.8
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 3.9e-131 472.2 436 55.0
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.1e-130 470.7 359 63.2
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 1.9e-130 469.9 286 75.9
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.1e-129 466.5 412 58.3
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 2.8e-129 466.1 358 64.0
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 3.6e-129 465.7 493 50.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 6.2e-129 464.9 366 63.4
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 3.4e-127 459.1 353 64.0
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 1.7e-126 456.8 438 54.8
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 2.9e-126 456.1 353 65.7
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 3.5e-124 449.1 323 65.0
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 7.3e-122 441.4 286 72.7
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 5.8e-119 431.8 364 57.7
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.0e-115 421.0 285 75.1
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 3.9e-115 419.1 403 54.3
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 9.0e-112 407.9 394 53.0
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 7.1e-109 398.3 402 53.7
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 2.6e-87 326.6 328 46.0
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.6e-84 317.4 217 66.8
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 7.4e-82 308.5 296 51.7
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.4e-77 294.3 231 62.8
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 3.4e-71 273.1 305 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.2e-68 264.6 371 38.0
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.6e-68 264.2 410 40.5
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.7e-68 263.5 299 46.8
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 3.6e-68 263.1 299 46.8
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 1.2e-58 231.5 360 37.5
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 5.5e-53 212.6 183 58.5
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 9.8e-50 201.8 336 32.1
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 4.0e-43 179.9 129 64.3
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 4.1e-40 169.9 120 67.5
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 2.0e-31 141.0 135 53.3
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 9.9e-18 95.5 59 72.9
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 4.6e-15 86.7 50 70.0
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 2.1e-07 61.2 52 57.7


User provided reference genes

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