Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 1.0e-59 233.4 137 100.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 8.8e-35 150.6 87 78.2
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 5.9e-31 137.9 88 68.2
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 7.7e-31 137.5 94 72.3
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.8e-30 135.2 90 71.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.9e-29 132.9 84 73.8
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 2.5e-29 132.5 76 80.3
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 3.2e-29 132.1 74 78.4
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 5.5e-29 131.3 75 78.7
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 7.2e-29 131.0 86 70.9
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 7.2e-29 131.0 101 66.3
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.6e-28 129.8 82 74.4
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.1e-28 129.4 106 61.3
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.1e-28 129.4 88 72.7
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.1e-28 129.4 88 72.7
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 2.7e-28 129.0 108 62.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.6e-28 128.6 75 74.7
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 4.7e-28 128.3 90 66.7
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 4.7e-28 128.3 62 88.7
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 6.1e-28 127.9 79 69.6
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 6.1e-28 127.9 94 68.1
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.1e-28 127.9 71 80.3
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 8.0e-28 127.5 67 83.6
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.4e-27 126.7 88 64.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.4e-27 126.7 82 72.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.4e-27 126.7 82 72.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.3e-27 125.9 86 68.6
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.3e-27 125.9 88 68.2
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 3.0e-27 125.6 67 80.6
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 3.0e-27 125.6 66 83.3
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 3.9e-27 125.2 78 71.8
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 5.2e-27 124.8 97 66.0
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.8e-27 124.0 70 77.1
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 8.8e-27 124.0 75 72.0
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.5e-26 123.2 77 72.7
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.5e-26 123.2 77 72.7
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.5e-26 123.2 80 70.0
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.0e-26 122.9 71 71.8
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 2.0e-26 122.9 83 65.1
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.6e-26 122.5 70 78.6
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.6e-26 122.5 70 78.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 4.4e-26 121.7 92 60.9
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 4.4e-26 121.7 82 70.7
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.7e-26 121.3 76 69.7
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 5.7e-26 121.3 74 77.0
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 7.4e-26 120.9 93 63.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 7.4e-26 120.9 77 71.4
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 9.7e-26 120.6 60 85.0
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.3e-25 120.2 87 63.2
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.3e-25 120.2 72 73.6
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.7e-25 119.8 102 58.8
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.7e-25 119.8 63 82.5
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.7e-25 119.8 63 82.5
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.2e-25 119.4 80 67.5
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 2.8e-25 119.0 80 66.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.8e-25 119.0 66 78.8
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.8e-25 118.2 91 63.7
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 4.8e-25 118.2 91 63.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 4.8e-25 118.2 131 50.4
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 6.3e-25 117.9 91 65.9
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 8.2e-25 117.5 72 69.4
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 8.2e-25 117.5 65 78.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-24 117.1 77 72.7
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.1e-24 117.1 102 57.8
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.1e-24 117.1 89 64.0
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.8e-24 116.3 91 62.6
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.8e-24 116.3 77 71.4
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.4e-24 115.9 91 61.5
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.4e-24 115.9 91 61.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.4e-24 115.9 101 57.4
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 3.1e-24 115.5 83 65.1
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 3.1e-24 115.5 66 77.3
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.1e-24 115.5 87 65.5
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 4.1e-24 115.2 66 74.2
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.1e-24 115.2 93 59.1
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 5.3e-24 114.8 91 61.5
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 7.0e-24 114.4 77 70.1
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.6e-23 113.2 59 81.4
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 4.5e-23 111.7 79 63.3
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 1.0e-22 110.5 78 61.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.7e-22 109.8 77 64.9
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 2.2e-22 109.4 79 64.6
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 2.9e-22 109.0 79 64.6
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.8e-22 108.6 64 75.0
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 5.0e-22 108.2 81 60.5
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 5.0e-22 108.2 66 72.7
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 6.5e-22 107.8 91 61.5
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 6.5e-22 107.8 70 68.6
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.1e-21 107.1 103 49.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.2e-21 105.1 73 64.4
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 5.5e-21 104.8 78 64.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 7.2e-21 104.4 82 56.1
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 7.2e-21 104.4 82 56.1
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.6e-20 103.2 103 51.5
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.0e-20 100.9 54 81.5
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.0e-19 100.5 75 58.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.4e-19 100.1 68 69.1
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 6.8e-19 97.8 51 78.4
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.6e-18 95.9 64 62.5
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 2.6e-18 95.9 70 61.4
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 5.9e-15 84.7 65 64.6
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.7e-14 83.2 55 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 7.2e-13 77.8 72 48.6
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.2e-07 60.5 29 82.8


User provided reference genes

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