Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002818 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.3e-212 742.7 346 100.0
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.9e-158 562.8 402 70.9
CSS0022832 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 9.1e-121 437.6 402 58.5
CSS0016779 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 2.9e-119 432.6 413 54.7
CSS0045488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 8.0e-93 344.7 248 69.0
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 2.8e-37 160.2 222 42.3
CSS0019932 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.4e-33 147.9 90 74.4
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 2.1e-24 117.5 342 29.8
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 3.5e-24 116.7 344 29.7
Rhsim01G0094200 Rhododendron simsii HOM05D013052 ORTHO05D012831 6.0e-24 115.9 362 30.1
Rhsim07G0240000 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.9e-22 110.9 233 35.6
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 2.0e-19 100.9 248 33.9
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 2.0e-19 100.9 248 33.9
QL11p055992 Quercus lobata HOM05D013052 ORTHO05D012831 4.5e-19 99.8 178 36.0
Rhsim07G0240100 Rhododendron simsii HOM05D013052 ORTHO05D012831 5.5e-17 92.8 243 31.7
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 3.0e-15 87.0 390 28.7
Rhsim11G0021200 Rhododendron simsii HOM05D013052 ORTHO05D000007 4.3e-14 83.2 145 35.9
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-09 68.2 189 28.0
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 9.4e-09 65.5 196 28.6
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-08 65.1 190 27.4
Rhsim07G0174600 Rhododendron simsii HOM05D018855 ORTHO05D012831 2.1e-08 64.3 105 41.9
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 6.1e-08 62.8 153 29.4
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-07 61.6 252 27.8
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 5.1e-07 59.7 190 26.3
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 2.0e-06 57.8 152 29.6
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 2.0e-06 57.8 177 28.2
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 4.4e-06 56.6 316 22.8


User provided reference genes

Program Settings