Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002781 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-43 178.7 85 100.0
CSS0017812 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.1e-33 144.1 84 81.0
CSS0011674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.6e-26 120.9 83 69.9
CSS0025077 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.0e-20 103.2 85 58.8
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-20 100.9 85 56.5
CSS0034647 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.4e-19 99.4 84 58.3
Rhsim01G0139300 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-18 95.9 85 54.1
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.6e-18 95.9 85 54.1
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.6e-18 94.4 85 50.6
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.0e-18 94.0 85 52.9
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-17 92.4 85 52.9
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.0e-17 91.7 85 49.4
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.9e-17 91.3 85 54.1
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.1e-17 90.9 85 52.9
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 1.1e-14 83.2 85 47.1
Rhsim09G0070000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-14 82.4 85 49.4
RhsimUnG0224600 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.8e-14 82.4 82 47.6
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.1e-14 81.6 85 43.5
Rhsim02G0152800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.3e-14 80.9 85 43.5
Rhsim03G0083500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-13 79.3 85 41.2
Rhsim02G0217100 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.0e-13 79.0 73 50.7
Rhsim09G0068100 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.0e-13 79.0 85 48.2
Rhsim01G0274800 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.6e-13 78.6 85 44.7
Rhsim11G0021500 Rhododendron simsii HOM05D002187 ORTHO05D002243 2.6e-13 78.6 78 51.3
Rhsim02G0177800 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.5e-13 77.8 78 51.3
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 5.9e-13 77.4 73 49.3
Rhsim10G0112100 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.7e-13 77.0 85 45.9
Rhsim03G0009500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.0e-12 76.6 85 45.9
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-12 76.3 85 40.0
Rhsim03G0167500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-12 75.9 85 45.9
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.2e-12 75.5 85 44.7
Rhsim01G0140300 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-12 75.5 85 44.7
Rhsim05G0162800 Rhododendron simsii HOM05D001637 ORTHO05D000006 2.2e-12 75.5 85 43.5
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.9e-12 75.1 85 43.5
Rhsim03G0080700 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.8e-12 74.7 85 40.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 5.0e-12 74.3 78 46.2
Rhsim09G0064700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-11 73.2 73 47.9
Rhsim09G0065000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-11 73.2 73 47.9
Rhsim12G0088700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-11 73.2 85 43.5
Rhsim01G0110800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-11 72.8 85 40.0
Rhsim01G0048000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.2e-11 71.2 78 44.9
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.5e-11 70.9 85 42.4
Rhsim03G0108700 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.2e-11 70.5 85 43.5
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.2e-11 70.5 85 40.0
Rhsim02G0229500 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.1e-10 68.9 85 35.3
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.1e-10 68.9 59 50.8
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 2.1e-10 68.9 85 43.5
Rhsim01G0175200 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.3e-09 65.5 73 43.8
RhsimUnG0155100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-08 62.8 76 38.2
vmacro07385 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 1.9e-08 62.4 76 38.2
Rhsim09G0083100 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-08 62.0 85 40.0
TAR391G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 2.5e-08 62.0 85 36.5
vmacro05354 Vaccinium macrocarpon HOM05D002580 ORTHO05D002811 3.3e-08 61.6 66 40.9
PSO040G0023 Papaver somniferum HOM05D000003 ORTHO05D000006 4.3e-08 61.2 84 34.5
Rhsim02G0151600 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.4e-08 60.5 73 43.8
CANSAT78G1606 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-07 59.7 69 42.0
FvH4_6g23032 Fragaria vesca HOM05D000003 ORTHO05D017879 1.7e-07 59.3 84 35.7
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.2e-07 58.9 62 43.5
CANSAT11G0839 Cannabis sativa HOM05D000003 ORTHO05D000006 3.7e-07 58.2 69 36.2
PSO447G0142 Papaver somniferum HOM05D000003 ORTHO05D000004 4.8e-07 57.8 55 45.5
Atru.chr6.1114 Acer truncatum HOM05D000003 ORTHO05D000124 8.2e-07 57.0 84 35.7
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 8.2e-07 57.0 85 34.1
Atru.chr7.1973 Acer truncatum HOM05D000003 ORTHO05D000006 1.4e-06 56.2 84 34.5
Actinidia31222 Actinidia chinensis HOM05D000003 ORTHO05D000006 1.4e-06 56.2 49 57.1
Rhsim05G0135000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-06 56.2 62 35.5
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-06 56.2 83 34.9
Rhsim09G0090900 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.4e-06 56.2 46 56.5
Rhsim05G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-06 55.8 60 43.3
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 55.5 88 34.1
Rhsim03G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.4e-06 55.5 84 40.5
Rhsim11G0048600 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.4e-06 55.5 55 49.1
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 85 32.9
PSO675G7157 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-06 55.1 67 43.3
Rhsim05G0192100 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.1e-06 55.1 56 48.2
Rhsim08G0187900 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.1e-06 55.1 73 42.5
Ah.10g031070 Amaranthus hybridus HOM05D000003 ORTHO05D000006 4.1e-06 54.7 84 34.5
Aqoxy1G03976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.1e-06 54.7 72 34.7
COL.COLO4_08414 Corchorus olitorius HOM05D000003 ORTHO05D000126 6.9e-06 53.9 52 44.2
Rhsim11G0006400 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.9e-06 53.9 85 36.5
FvH4_1g17821 Fragaria vesca HOM05D000003 ORTHO05D046457 9.1e-06 53.5 69 36.2
Rhsim02G0183800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.1e-06 53.5 85 38.8
Rhsim08G0119400 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.1e-06 53.5 53 41.5


User provided reference genes

Program Settings