Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 9.2e-62 240.0 115 100.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 9.2e-62 240.0 115 100.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.5e-51 206.1 115 86.1
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.6e-50 201.4 109 87.2
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.4e-49 199.5 115 80.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 4.4e-48 194.5 126 75.4
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 9.9e-48 193.4 111 81.1
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.3e-47 193.0 111 80.2
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.7e-47 192.6 114 78.9
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.2e-47 192.2 113 78.8
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 2.9e-47 191.8 112 79.5
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.4e-46 189.5 114 76.3
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.9e-46 189.1 111 79.3
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 2.4e-46 188.7 111 79.3
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.4e-46 188.7 111 79.3
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 4.2e-46 188.0 111 78.4
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 4.2e-46 188.0 115 77.4
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 9.3e-46 186.8 115 74.8
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.6e-45 186.0 100 88.0
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 2.1e-45 185.7 115 75.7
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.5e-45 184.9 128 71.9
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 4.6e-45 184.5 100 86.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 4.6e-45 184.5 100 86.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.3e-44 183.0 111 75.7
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 2.3e-44 182.2 112 75.0
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 3.0e-44 181.8 114 74.6
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 3.0e-44 181.8 112 75.9
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 6.6e-44 180.6 100 85.0
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 8.7e-44 180.3 113 71.7
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 8.7e-44 180.3 112 72.3
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.1e-43 179.9 110 76.4
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 1.5e-43 179.5 113 71.7
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.9e-43 179.1 113 76.1
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.5e-43 178.7 113 74.3
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 3.3e-43 178.3 115 71.3
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 4.3e-43 177.9 114 73.7
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 4.3e-43 177.9 113 70.8
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 9.6e-43 176.8 114 70.2
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 9.6e-43 176.8 103 78.6
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 9.6e-43 176.8 114 71.9
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.6e-42 176.0 113 69.0
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-42 176.0 134 64.9
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.6e-42 176.0 112 72.3
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.1e-42 175.6 114 71.9
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.1e-42 175.6 112 70.5
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 3.6e-42 174.9 113 69.0
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 3.6e-42 174.9 100 79.0
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 3.6e-42 174.9 100 79.0
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.2e-42 174.1 96 84.4
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.1e-41 173.3 113 69.0
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.1e-41 173.3 114 66.7
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.4e-41 172.9 100 79.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.8e-41 172.6 99 78.8
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 3.1e-41 171.8 100 80.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.3e-41 171.0 98 82.7
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 6.9e-41 170.6 106 73.6
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 6.9e-41 170.6 115 68.7
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 9.0e-41 170.2 115 68.7
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 9.0e-41 170.2 100 81.0
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.5e-40 169.5 112 70.5
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.5e-40 169.5 112 70.5
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.0e-40 169.1 112 69.6
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.6e-40 168.7 112 70.5
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.6e-40 168.7 112 70.5
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 3.4e-40 168.3 99 78.8
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 3.4e-40 168.3 96 78.1
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 4.5e-40 167.9 100 77.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.5e-40 167.9 112 69.6
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 7.6e-40 167.2 112 69.6
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 9.9e-40 166.8 115 69.6
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 9.9e-40 166.8 100 77.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.3e-39 166.4 107 74.8
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.7e-39 166.0 100 76.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 2.9e-39 165.2 107 69.2
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 2.9e-39 165.2 107 69.2
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 2.9e-39 165.2 107 69.2
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 4.9e-39 164.5 102 72.5
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 4.9e-39 164.5 126 63.5
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.1e-38 163.3 104 70.2
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.9e-38 162.5 100 74.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 2.4e-38 162.2 116 69.8
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.2e-37 159.8 100 72.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.2e-37 159.8 104 71.2
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.7e-37 158.7 98 71.4
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 6.0e-37 157.5 100 73.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 7.9e-37 157.1 106 67.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 7.9e-37 157.1 100 73.0
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.9e-37 157.1 86 80.2
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.0e-36 156.8 110 62.7
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.3e-36 156.4 108 63.0
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.3e-36 156.4 98 69.4
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.3e-36 155.6 101 70.3
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 1.9e-35 152.5 98 70.4
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 2.5e-35 152.1 100 73.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 3.3e-35 151.8 102 70.6
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.6e-35 151.0 108 66.7
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.4e-35 150.6 86 76.7
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.6e-34 149.4 100 70.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.6e-34 149.4 107 66.4
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.8e-34 148.7 100 69.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 2.8e-34 148.7 89 76.4
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.7e-34 148.3 109 66.1
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 4.8e-34 147.9 100 68.0
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 2.4e-33 145.6 100 65.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 3.1e-33 145.2 95 68.4
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 3.1e-33 145.2 100 68.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 2.0e-32 142.5 100 67.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 7.6e-32 140.6 99 64.6
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.3e-31 139.8 103 60.2
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.7e-31 139.4 100 65.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 1.9e-30 136.0 85 74.1
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.6e-29 132.9 87 71.3
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-29 132.9 88 68.2
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 2.7e-29 132.1 92 65.2
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.1e-27 126.7 88 64.8
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 3.3e-27 125.2 75 74.7
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 1.1e-25 120.2 77 68.8
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.1e-25 118.6 106 53.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.3e-23 113.2 75 66.7
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 4.2e-22 108.2 93 55.9
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 4.6e-21 104.8 69 69.6
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.0e-20 103.6 100 50.0
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 2.3e-20 102.4 67 67.2
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.3e-18 96.7 61 65.6
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 9.0e-17 90.5 61 62.3
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.6e-16 89.0 52 71.2
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 5.0e-15 84.7 66 60.6
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.1e-09 67.0 62 56.5
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.8e-09 66.2 34 85.3
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.2e-08 63.5 71 42.3
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 5.9e-08 61.2 108 37.0


User provided reference genes

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