Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002773 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 3.1e-57 224.9 115 100.0
CSS0021049 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 4.6e-21 104.8 115 58.3
CSS0023693 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 5.1e-20 101.3 115 57.4
CSS0046915 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 5.3e-17 91.3 72 66.7
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 5.9e-16 87.8 114 46.5
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 4.6e-13 78.2 112 50.0
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.1e-11 73.6 104 49.0
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.3e-11 72.0 108 46.3
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 1.3e-10 70.1 102 44.1
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 1.3e-10 70.1 102 42.2
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 1.7e-10 69.7 102 42.2
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 2.8e-10 68.9 106 45.3
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 4.8e-10 68.2 64 60.9
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 6.3e-10 67.8 105 42.9
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 6.3e-10 67.8 96 43.8
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 6.3e-10 67.8 105 41.9
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 8.2e-10 67.4 104 39.4
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.4e-09 66.6 106 44.3
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 6.9e-09 64.3 98 40.8
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.0e-08 62.8 106 43.4
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 3.4e-08 62.0 100 43.0
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.5e-08 61.6 104 43.3
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 4.5e-08 61.6 105 40.0
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 5.9e-08 61.2 103 39.8
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 5.9e-08 61.2 98 40.8
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 1.0e-07 60.5 104 35.6
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.2e-07 59.3 94 43.6
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 8.5e-07 57.4 66 54.5
Hma1.2p1_2487F.1_g323130 Hydrangea macrophylla HOM05D024992 ORTHO05D022110 8.5e-07 57.4 52 53.8
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 1.9e-06 56.2 62 50.0
MD11G1053100 Malus domestica HOM05D007641 ORTHO05D022110 9.4e-06 53.9 43 62.8


User provided reference genes

Program Settings