Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002734 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.9e-37 158.7 81 100.0
CSS0007437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.9e-37 158.7 81 100.0
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.0e-23 112.1 73 76.7
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-22 108.2 73 75.3
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-21 104.0 73 71.2
CSS0048496 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-20 101.7 74 67.6
CSS0017626 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-20 101.3 73 68.5
CSS0000308 Camellia sinensis var. sinensis HOM05D020206 ORTHO05D000047 6.2e-20 100.5 73 67.1
CSS0047086 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D112296 3.1e-19 98.2 81 66.7
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.0e-18 95.5 79 58.2
CSS0005741 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-17 92.8 73 65.8
CSS0049599 Camellia sinensis var. sinensis HOM05D020206 ORTHO05D000047 6.4e-17 90.5 73 65.8
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 1.2e-15 86.3 74 55.4
CSS0008068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-14 82.0 77 53.2
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-14 82.0 77 53.2
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 8.1e-12 73.6 75 57.3
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.9e-11 70.1 74 47.3
CSS0005797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.0e-10 68.9 68 54.4
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 6.4e-09 63.9 69 49.3
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 6.4e-09 63.9 69 49.3
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.3e-09 63.5 74 41.9
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 1.1e-08 63.2 69 42.0
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.1e-08 63.2 69 49.3
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.4e-08 62.8 70 38.6
arahy.Tifrunner.gnm1.ann1.CN0JQN Arachis hypogaea HOM05D000002 ORTHO05D000047 3.2e-08 61.6 78 41.0
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.1e-08 61.2 67 50.7
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 4.1e-08 61.2 70 42.9
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 4.1e-08 61.2 75 45.3
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 5.4e-08 60.8 70 40.0
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 7.1e-08 60.5 69 43.5
vmacro05078 Vaccinium macrocarpon HOM05D000207 ORTHO05D000606 9.2e-08 60.1 64 48.4
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 82 40.2
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 1.2e-07 59.7 70 38.6
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-07 58.5 74 44.6
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 58.5 76 43.4
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 2.7e-07 58.5 67 38.8
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 2.7e-07 58.5 70 34.3
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-07 58.2 72 40.3
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.5e-07 58.2 62 45.2
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 3.5e-07 58.2 69 42.0
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 3.5e-07 58.2 69 40.6
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-07 57.8 57 47.4
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-07 57.8 57 47.4
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 4.6e-07 57.8 59 45.8
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.0e-07 57.4 68 41.2
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.0e-07 57.4 68 41.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.0e-07 57.4 68 41.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.0e-07 57.4 68 41.2
CSS0036394 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-07 57.4 67 41.8
Hma1.2p1_0946F.1_g240310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-07 57.4 72 41.7
Prupe.4G181800 Prunus persica HOM05D000002 ORTHO05D000047 6.0e-07 57.4 85 36.5
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 6.0e-07 57.4 73 41.1
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-07 57.0 68 39.7
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-07 57.0 76 42.1
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-07 57.0 68 39.7
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.8e-07 57.0 73 42.5
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 56.6 72 38.9
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-06 56.6 75 46.7
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 1.0e-06 56.6 74 41.9
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 1.0e-06 56.6 74 41.9
Manes.09G001867 Manihot esculenta HOM05D000002 ORTHO05D000047 1.0e-06 56.6 69 42.0
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 62 45.2
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-06 56.2 72 38.9
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-06 56.2 72 40.3
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 1.3e-06 56.2 85 36.5
Hma1.2p1_0503F.1_g168010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 55.8 76 42.1
CSS0026947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-06 55.5 61 52.5
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 2.3e-06 55.5 85 35.3
CSS0000724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 72 36.1
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-06 55.1 61 45.9
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 61 45.9
Hma1.2p1_0020F.1_g014090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 55.1 68 38.2
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 55.1 68 38.2
Hma1.2p1_0661F.1_g198180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 55.1 76 40.8
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 55.1 75 45.3
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 54.7 61 45.9
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 3.9e-06 54.7 73 39.7
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.7 78 39.7
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.7 78 39.7
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.7 78 39.7
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.7 78 39.7
TPR.G28095 Trifolium pratense HOM05D000002 ORTHO05D000001 5.1e-06 54.3 73 38.4
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 5.1e-06 54.3 62 41.9
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 53.9 60 41.7
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 6.6e-06 53.9 57 47.4
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 8.6e-06 53.5 70 37.1
ClCG07G006100 Citrullus lanatus HOM05D000002 ORTHO05D000001 8.6e-06 53.5 81 34.6
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-06 53.5 60 41.7


User provided reference genes

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