Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002716 Camellia sinensis var. sinensis HOM05D050131 ORTHO05D000926 6.0e-33 143.7 76 100.0
CSS0019447 Camellia sinensis var. sinensis HOM05D050131 ORTHO05D000926 6.6e-16 87.0 69 75.4
Dinv11728 Davidia involucrata HOM05D000187 ORTHO05D000926 9.5e-15 83.2 57 75.4
Hma1.2p1_0044F.1_g025990 Hydrangea macrophylla HOM05D000187 ORTHO05D000926 1.2e-14 82.8 49 81.6
Potri.005G090800 Populus trichocarpa HOM05D000187 ORTHO05D000926 1.2e-14 82.8 82 58.5
TAR371G1270 Trochodendron aralioides HOM05D000187 ORTHO05D000926 1.6e-14 82.4 56 75.0
CSS0049850 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000926 2.1e-14 82.0 80 60.0
vmacro08835 Vaccinium macrocarpon HOM05D000187 ORTHO05D000926 2.1e-14 82.0 46 87.0
Aqoxy2G00056 Aquilegia oxysepala HOM05D000187 ORTHO05D000926 3.6e-14 81.3 71 63.4
Manes.11G102000 Manihot esculenta HOM05D000187 ORTHO05D000926 3.6e-14 81.3 79 60.8
Prupe.7G271700 Prunus persica HOM05D000187 ORTHO05D000926 3.6e-14 81.3 46 87.0
Sabra05G0075000 Salix brachista HOM05D000187 ORTHO05D000926 3.6e-14 81.3 47 85.1
CiPaw.05G170700 Carya illinoinensis HOM05D000187 ORTHO05D000926 4.7e-14 80.9 73 63.0
MBI09_g00987_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 4.7e-14 80.9 45 88.9
MD00G1145000 Malus domestica HOM05D000187 ORTHO05D000926 4.7e-14 80.9 71 64.8
TAR371G0805 Trochodendron aralioides HOM05D000187 ORTHO05D000926 4.7e-14 80.9 56 75.0
MSTRG.2064 Avicennia marina HOM05D000187 ORTHO05D000926 6.2e-14 80.5 48 83.3
Cfa008758 Carpinus fangiana HOM05D000187 ORTHO05D000926 6.2e-14 80.5 58 70.7
CiPaw.06G061700 Carya illinoinensis HOM05D000187 ORTHO05D000926 6.2e-14 80.5 46 84.8
TWI53G1725 Tripterygium wilfordii HOM05D000187 ORTHO05D000926 6.2e-14 80.5 56 75.0
Dinv17628 Davidia involucrata HOM05D000187 ORTHO05D000926 8.1e-14 80.1 56 75.0
TAR629G3309 Trochodendron aralioides HOM05D000187 ORTHO05D000926 8.1e-14 80.1 46 84.8
Ah.01g012510 Amaranthus hybridus HOM05D000187 ORTHO05D000926 1.1e-13 79.7 46 82.6
Lalb_Chr06g0163871 Lupinus albus HOM05D000187 ORTHO05D000926 1.1e-13 79.7 57 73.7
Potri.007G073200 Populus trichocarpa HOM05D000187 ORTHO05D000926 1.1e-13 79.7 50 78.0
Atru.chr11.1136 Acer truncatum HOM05D000187 ORTHO05D000926 1.4e-13 79.3 80 56.2
CSS0014041 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000926 1.4e-13 79.3 46 84.8
AUR62017719 Chenopodium quinoa HOM05D000187 ORTHO05D000926 1.4e-13 79.3 74 58.1
AUR62032960 Chenopodium quinoa HOM05D000187 ORTHO05D000926 1.4e-13 79.3 74 58.1
Oeu027919.1 Olea europaea HOM05D000187 ORTHO05D000926 1.4e-13 79.3 49 79.6
ClCG02G014100 Citrullus lanatus HOM05D000187 ORTHO05D000926 1.8e-13 79.0 48 79.2
MELO3C011752.2 Cucumis melo HOM05D000187 ORTHO05D000926 1.8e-13 79.0 48 79.2
CsaV3_5G006070 Cucumis sativus L. HOM05D000187 ORTHO05D000926 1.8e-13 79.0 48 79.2
Rhsim04G0130800 Rhododendron simsii HOM05D000187 ORTHO05D000926 1.8e-13 79.0 48 79.2
Sed0017683 Sechium edule HOM05D000187 ORTHO05D000926 1.8e-13 79.0 48 79.2
Sopen02g002340 Solanum pennellii HOM05D000187 ORTHO05D000926 1.8e-13 79.0 46 82.6
Duzib052G0316 Durio zibethinus HOM05D000187 ORTHO05D000926 2.4e-13 78.6 46 84.8
RcHm_v2.0_Chr2g0084221 Rosa chinensis HOM05D000187 ORTHO05D000926 2.4e-13 78.6 75 61.3
GSVIVG01026184001 Vitis vinifera HOM05D000187 ORTHO05D000926 2.4e-13 78.6 79 58.2
COL.COLO4_33056 Corchorus olitorius HOM05D000187 ORTHO05D000926 3.1e-13 78.2 46 82.6
Nitab4.5_0004967g0020 Nicotiana tabacum HOM05D000187 ORTHO05D000926 3.1e-13 78.2 45 84.4
Sabra07G0061700 Salix brachista HOM05D000187 ORTHO05D000926 3.1e-13 78.2 45 84.4
Sc06g0006750 Simmondsia chinensis HOM05D000187 ORTHO05D000926 3.1e-13 78.2 48 79.2
Thecc.02G157600 Theobroma cacao HOM05D000187 ORTHO05D000926 3.1e-13 78.2 45 86.7
EL10Ac9g22972 Beta vulgaris HOM05D000187 ORTHO05D000926 5.2e-13 77.4 71 60.6
CANSAT78G2433 Cannabis sativa HOM05D000187 ORTHO05D000926 5.2e-13 77.4 46 82.6
Ca_11221_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000926 5.2e-13 77.4 80 56.2
Ciclev10032094m.g Citrus clementina HOM05D000187 ORTHO05D000926 5.2e-13 77.4 45 82.2
Glyma.20G104300 Glycine max HOM05D000187 ORTHO05D000926 5.2e-13 77.4 46 82.6
Oeu006341.1 Olea europaea HOM05D000187 ORTHO05D000926 5.2e-13 77.4 49 75.5
Peaxi162Scf00334g00028 Petunia axillaris HOM05D000187 ORTHO05D000926 5.2e-13 77.4 44 86.4
PGR044G0989 Punica granatum HOM05D000187 ORTHO05D000926 5.2e-13 77.4 45 84.4
SGA_v2.0_scaffold256G45634 Striga asiatica HOM05D000187 ORTHO05D000926 5.2e-13 77.4 48 77.1
Gohir.A03G165500 Gossypium hirsutum HOM05D000187 ORTHO05D000926 6.8e-13 77.0 45 82.2
Gohir.D02G188700 Gossypium hirsutum HOM05D000187 ORTHO05D000926 6.8e-13 77.0 45 82.2
Gorai.005G211500 Gossypium raimondii HOM05D000187 ORTHO05D000926 6.8e-13 77.0 45 82.2
Lj5g0016641 Lotus japonicus HOM05D000187 ORTHO05D000926 6.8e-13 77.0 46 80.4
MD15G1141500 Malus domestica HOM05D000187 ORTHO05D000926 6.8e-13 77.0 71 63.4
Medtr1g114240 Medicago truncatula HOM05D000187 ORTHO05D000926 6.8e-13 77.0 45 84.4
QL03p045866 Quercus lobata HOM05D000187 ORTHO05D000926 6.8e-13 77.0 47 78.7
Actinidia38419 Actinidia chinensis HOM05D000187 ORTHO05D000926 8.9e-13 76.6 76 60.5
Glyma.10G284900 Glycine max HOM05D000187 ORTHO05D000926 8.9e-13 76.6 46 82.6
Nitab4.5_0000661g0040 Nicotiana tabacum HOM05D000187 ORTHO05D000926 8.9e-13 76.6 45 82.2
PSO675G0594 Papaver somniferum HOM05D000187 ORTHO05D000926 8.9e-13 76.6 49 75.5
Hund08620 Selenicereus undatus HOM05D000187 ORTHO05D000926 8.9e-13 76.6 72 61.1
unitig_699.g19552 Utricularia gibba HOM05D000187 ORTHO05D000926 8.9e-13 76.6 46 78.3
Cc11_g03510 Coffea canephora HOM05D000187 ORTHO05D000926 1.2e-12 76.3 46 80.4
Lj6C717T11 Lonicera japonica HOM05D000187 ORTHO05D000926 1.2e-12 76.3 50 82.0
Phvul.007G015800 Phaseolus vulgaris HOM05D000187 ORTHO05D000926 1.2e-12 76.3 79 55.7
Psat6g233200 Pisum sativum HOM05D000187 ORTHO05D000926 1.2e-12 76.3 46 80.4
FvH4_1g00010 Fragaria vesca HOM05D000187 ORTHO05D000926 1.5e-12 75.9 70 62.9
FAN28G0400 Fragaria x ananassa HOM05D000187 ORTHO05D000926 1.5e-12 75.9 70 62.9
PGR044G2289 Punica granatum HOM05D000187 ORTHO05D000926 2.0e-12 75.5 45 82.2
Sed0013552 Sechium edule HOM05D000187 ORTHO05D000926 2.0e-12 75.5 46 78.3
HPP92_027500 Vanilla planifolia HOM05D000187 ORTHO05D000926 2.6e-12 75.1 45 80.0
MSTRG.13682 Avicennia marina HOM05D000187 ORTHO05D000926 3.4e-12 74.7 50 74.0
Duzib132G0432 Durio zibethinus HOM05D000187 ORTHO05D000926 3.4e-12 74.7 79 55.7
Duzib248G1191 Durio zibethinus HOM05D000187 ORTHO05D000926 3.4e-12 74.7 45 82.2
arahy.Tifrunner.gnm1.ann1.21431W Arachis hypogaea HOM05D000187 ORTHO05D000926 4.4e-12 74.3 80 52.5
Migut.E00691 Erythranthe guttata HOM05D000187 ORTHO05D000926 4.4e-12 74.3 46 76.1
Os08g0548300 Oryza sativa ssp. japonica HOM05D000187 ORTHO05D000926 4.4e-12 74.3 48 72.9
PSO541G3835 Papaver somniferum HOM05D000187 ORTHO05D000926 4.4e-12 74.3 45 80.0
TPR.G4099 Trifolium pratense HOM05D000187 ORTHO05D000926 4.4e-12 74.3 46 78.3
VMungo0720G1668 Vigna mungo HOM05D000187 ORTHO05D000926 4.4e-12 74.3 79 54.4
DCAR_023465 Daucus carota HOM05D003773 ORTHO05D004377 5.8e-12 73.9 47 76.6
DCAR_030709 Daucus carota HOM05D000187 ORTHO05D000926 5.8e-12 73.9 47 76.6
Gohir.A01G012500 Gossypium hirsutum HOM05D000187 ORTHO05D000926 7.6e-12 73.6 45 82.2
A05p29220 Brassica napus HOM05D000187 ORTHO05D000926 9.9e-12 73.2 71 54.9
C05p44720 Brassica napus HOM05D000187 ORTHO05D000926 9.9e-12 73.2 71 54.9
BraA05t21806Z Brassica rapa HOM05D000187 ORTHO05D000926 9.9e-12 73.2 45 77.8
Thhalv10021098m.g Eutrema salsugineum HOM05D000187 ORTHO05D000926 9.9e-12 73.2 45 77.8
arahy.Tifrunner.gnm1.ann1.4G0ENY Arachis hypogaea HOM05D000187 ORTHO05D000926 1.3e-11 72.8 80 51.2
AL3G33470 Arabidopsis lyrata HOM05D000187 ORTHO05D000926 1.7e-11 72.4 79 53.2
AT3G19910 Arabidopsis thaliana HOM05D000187 ORTHO05D000926 1.7e-11 72.4 79 53.2
TWI74G0652 Tripterygium wilfordii HOM05D000187 ORTHO05D000926 1.7e-11 72.4 45 77.8
BcaC05g28395 Brassica carinata HOM05D000187 ORTHO05D000926 2.2e-11 72.0 71 54.9
BcaC09g48948 Brassica carinata HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 75.6
A01p34840 Brassica napus HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 75.6
C01p44240 Brassica napus HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 75.6
BolC1t04384H Brassica oleracea HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 75.6
BolC5t33199H Brassica oleracea HOM05D000187 ORTHO05D000926 2.2e-11 72.0 71 54.9
Gohir.D01G013700 Gossypium hirsutum HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 80.0
Sp3g17930 Schrenkiella parvula HOM05D000187 ORTHO05D000926 2.2e-11 72.0 45 75.6
BcaB06g26060 Brassica carinata HOM05D000187 ORTHO05D000926 2.9e-11 71.6 45 75.6
THA.LOC104815235 Tarenaya hassleriana HOM05D000187 ORTHO05D000926 2.9e-11 71.6 44 81.8
unitig_27.g25280 Utricularia gibba HOM05D000187 ORTHO05D000926 2.9e-11 71.6 48 70.8
ATR0810G020 Amborella trichopoda HOM05D000187 ORTHO05D000926 4.9e-11 70.9 45 75.6
CARHR095440 Cardamine hirsuta HOM05D000187 ORTHO05D000926 4.9e-11 70.9 71 53.5
Gorai.002G015500 Gossypium raimondii HOM05D000187 ORTHO05D000926 6.4e-11 70.5 45 77.8
Actinidia13717 Actinidia chinensis HOM05D000187 ORTHO05D000926 8.4e-11 70.1 71 59.2
Zm00001eb319790 Zea mays HOM05D000187 ORTHO05D000926 8.4e-11 70.1 49 67.3
BraA01t03567Z Brassica rapa HOM05D000187 ORTHO05D000926 1.1e-10 69.7 45 73.3
Carub.0003s1981 Capsella rubella HOM05D000187 ORTHO05D000926 1.1e-10 69.7 70 55.7
CDE02G0893 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 1.1e-10 69.7 44 75.0
ECA234G0105 Erigeron canadensis HOM05D000187 ORTHO05D000926 1.1e-10 69.7 46 73.9
Zm00001eb103610 Zea mays HOM05D000187 ORTHO05D000926 1.4e-10 69.3 48 68.8
CDE04G3378 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 1.9e-10 68.9 44 77.3
HanXRQChr05g0139681 Helianthus annuus HOM05D000187 ORTHO05D000926 1.9e-10 68.9 45 75.6
Aa31LG8G6730 Aethionema arabicum HOM05D000187 ORTHO05D000926 2.4e-10 68.6 44 77.3
Eucgr.G02582 Eucalyptus grandis HOM05D000187 ORTHO05D000926 4.1e-10 67.8 49 75.5
Lsat_1_v5_gn_4_64601 Lactuca sativa HOM05D000187 ORTHO05D000926 5.4e-10 67.4 45 75.6
HPP92_025852 Vanilla planifolia HOM05D000187 ORTHO05D000926 1.2e-09 66.2 46 69.6
Os09g0535100 Oryza sativa ssp. japonica HOM05D000187 ORTHO05D000926 2.7e-09 65.1 49 65.3
Zm00001eb202700 Zea mays HOM05D000187 ORTHO05D000926 3.5e-09 64.7 45 68.9
AagrBONN_evm.TU.Sc2ySwM_368.3308 Anthoceros agrestis HOM05D000187 ORTHO05D000926 5.1e-08 60.8 48 58.3
ATR1134G018 Amborella trichopoda HOM05D000187 ORTHO05D000926 6.6e-08 60.5 50 58.0
Mapoly0148s0003 Marchantia polymorpha HOM05D000187 ORTHO05D000926 1.9e-07 58.9 48 54.2
SMO228G0130 Selaginella moellendorffii HOM05D000187 ORTHO05D000926 1.6e-06 55.8 42 59.5
Hma1.2p1_0008F-2.1_g005900 Hydrangea macrophylla HOM05D000187 ORTHO05D000926 2.1e-06 55.5 33 75.8
Pp3c5_17300 Physcomitrium patens HOM05D000187 ORTHO05D000926 2.1e-06 55.5 48 52.1
CBR_g18643 Chara braunii HOM05D000187 ORTHO05D000926 2.8e-06 55.1 48 60.4
SEGI_34519 Sequoiadendron giganteum HOM05D000187 ORTHO05D000926 6.2e-06 53.9 43 58.1
THA.LOC104811128 Tarenaya hassleriana HOM05D000187 ORTHO05D000926 6.2e-06 53.9 49 57.1
CDE08G0972 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 8.1e-06 53.5 44 56.8
Manes.06G165800 Manihot esculenta HOM05D000187 ORTHO05D000926 8.1e-06 53.5 50 56.0


User provided reference genes

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