Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 7.1e-116 421.8 475 100.0
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.6e-67 261.2 505 82.0
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 5.7e-65 252.7 558 59.0
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 4.7e-59 233.0 607 69.0
CSS0037889 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.6e-46 191.4 132 76.5
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 9.5e-36 155.6 167 52.7
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 6.1e-35 152.9 169 51.5
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 4.9e-32 143.3 121 62.8
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 1.8e-31 141.4 135 54.8
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 2.4e-31 141.0 136 55.1
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 3.1e-31 140.6 155 51.0
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 5.4e-31 139.8 155 50.3
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.6e-30 138.3 134 55.2
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 2.0e-30 137.9 155 51.0
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 3.5e-30 137.1 247 39.7
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 4.5e-30 136.7 155 49.7
CSS0037045 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 2.9e-29 134.0 67 95.5
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 5.0e-29 133.3 155 49.7
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 1.5e-28 131.7 136 52.2
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 3.3e-28 130.6 118 61.9
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 4.3e-28 130.2 136 52.2
CSS0022359 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 7.3e-28 129.4 67 94.0
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 2.1e-27 127.9 135 51.1
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 6.1e-27 126.3 135 49.6
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 8.0e-27 125.9 148 50.0
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 8.0e-27 125.9 148 49.3
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 1.0e-26 125.6 136 52.9
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 1.4e-26 125.2 135 53.3
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 2.3e-26 124.4 127 52.0
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 3.0e-26 124.0 133 49.6
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 3.0e-26 124.0 136 50.7
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 1.5e-25 121.7 146 47.9
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 1.7e-24 118.2 136 47.1
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 2.2e-24 117.9 136 48.5
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 2.9e-24 117.5 136 49.3
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 8.3e-24 115.9 136 47.1
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 3.2e-23 114.0 136 47.1
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 9.2e-23 112.5 136 45.6
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 9.2e-23 112.5 136 47.8
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 1.6e-22 111.7 125 48.0
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.6e-22 111.7 136 45.6
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.6e-22 111.7 136 45.6
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 2.0e-22 111.3 116 53.4
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 1.0e-21 109.0 136 47.1
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 1.0e-21 109.0 149 45.6
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 1.7e-21 108.2 135 45.2
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 1.7e-21 108.2 135 45.2
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 5.0e-21 106.7 136 44.9
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 1.1e-20 105.5 133 43.6
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 4.3e-20 103.6 136 43.4
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 9.5e-20 102.4 107 49.5
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 1.2e-19 102.1 130 48.5
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 1.6e-19 101.7 126 48.4
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 6.2e-19 99.8 113 46.0
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 8.0e-19 99.4 148 41.9
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 8.0e-19 99.4 136 46.3
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 1.4e-18 98.6 134 44.0
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 1.8e-18 98.2 136 41.9
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 3.1e-18 97.4 116 45.7
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 8.9e-18 95.9 131 40.5
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 1.2e-17 95.5 112 45.5
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 1.2e-17 95.5 112 45.5
Lsat_1_v5_gn_8_10680 Lactuca sativa HOM05D007340 ORTHO05D008979 1.2e-17 95.5 124 41.1
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 7.5e-17 92.8 120 43.3
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 1.3e-16 92.0 147 36.1
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 4.9e-16 90.1 114 45.6
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.1e-15 89.0 117 41.9
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 1.4e-15 88.6 149 36.2
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 1.4e-15 88.6 146 34.9
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 5.4e-15 86.7 146 35.6
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 1.2e-14 85.5 148 35.1
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 1.2e-14 85.5 149 35.6
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 1.6e-14 85.1 146 37.0
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 2.7e-14 84.3 165 38.2
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 3.5e-14 84.0 148 35.1
RcHm_v2.0_Chr4g0419111 Rosa chinensis HOM05D007340 ORTHO05D008979 6.0e-14 83.2 148 48.0
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 7.8e-14 82.8 106 42.5
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 1.0e-13 82.4 134 36.6
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 1.0e-13 82.4 66 60.6
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 1.0e-13 82.4 135 36.3
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.7e-13 81.6 165 37.0
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 2.3e-13 81.3 64 60.9
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 3.9e-13 80.5 146 34.9
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 3.9e-13 80.5 119 40.3
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 6.6e-13 79.7 142 36.6
Gohir.D08G046350 Gossypium hirsutum HOM05D007340 ORTHO05D008979 8.6e-13 79.3 118 39.0
Gorai.004G045600 Gossypium raimondii HOM05D007340 ORTHO05D008979 8.6e-13 79.3 118 39.0
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 5.6e-12 76.6 135 34.8
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 1.1e-10 72.4 64 56.2
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 1.2e-09 68.9 114 36.0
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 2.6e-09 67.8 76 46.1
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 4.4e-09 67.0 49 63.3
Prupe.1G570100 Prunus persica HOM05D007340 ORTHO05D008979 3.7e-08 63.9 56 62.5
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 1.1e-07 62.4 77 42.9
Nn1g01889 Nelumbo nucifera HOM05D007340 ORTHO05D008979 5.4e-07 60.1 58 46.6
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 1.2e-06 58.9 48 54.2
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 2.1e-06 58.2 131 31.3
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 2.7e-06 57.8 85 38.8
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 3.5e-06 57.4 107 36.4


User provided reference genes

Program Settings