Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002676 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 1.7e-73 279.3 142 100.0
CSS0018665 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 4.6e-47 191.4 102 95.1
CSS0001589 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D028375 1.1e-45 186.8 102 93.1
CSS0015436 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 7.4e-45 184.1 102 91.2
CSS0030645 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 6.3e-44 181.0 102 90.2
Actinidia30138 Actinidia chinensis HOM05D000001 ORTHO05D002182 1.7e-17 93.2 112 55.4
Rhsim13G0038900 Rhododendron simsii HOM05D000001 ORTHO05D002182 2.9e-17 92.4 112 51.8
Rhsim01G0261400 Rhododendron simsii HOM05D000001 ORTHO05D002182 1.2e-15 87.0 110 51.8
Actinidia09526 Actinidia chinensis HOM05D000001 ORTHO05D002182 6.1e-15 84.7 111 52.3
vmacro14807 Vaccinium macrocarpon HOM05D000001 ORTHO05D002182 4.9e-12 75.1 109 46.8
Dinv16381 Davidia involucrata HOM05D000001 ORTHO05D002182 6.3e-12 74.7 111 46.8
Lj1C72G5 Lonicera japonica HOM05D000001 ORTHO05D002182 1.5e-08 63.5 103 42.7
Lj1A72T50 Lonicera japonica HOM05D000001 ORTHO05D002182 1.9e-08 63.2 112 41.1
Dinv30155 Davidia involucrata HOM05D000753 ORTHO05D028375 4.3e-08 62.0 40 77.5
CSS0007674 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 7.3e-08 61.2 41 82.9
CSS0011353 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 1.6e-07 60.1 38 78.9
CSS0040050 Camellia sinensis var. sinensis HOM05D000753 ORTHO05D001988 1.6e-07 60.1 38 78.9
vmacro05184 Vaccinium macrocarpon HOM05D000753 ORTHO05D001988 2.1e-07 59.7 38 76.3
CARHR202110 Cardamine hirsuta HOM05D000753 ORTHO05D001988 3.0e-06 55.8 41 73.2
Cfa002466 Carpinus fangiana HOM05D000001 ORTHO05D002182 4.0e-06 55.5 107 33.6


User provided reference genes

Program Settings