Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.6e-16 89.0 68 100.0
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.6e-16 89.0 68 100.0
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.2e-15 85.1 67 95.5
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 5.7e-11 70.5 69 79.7
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 7.5e-11 70.1 68 63.2
Haze_25860 Corylus avellana HOM05D001384 ORTHO05D001215 4.8e-10 67.4 72 73.6
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 1.4e-09 65.9 68 60.3
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 2.4e-09 65.1 68 61.8
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 5.4e-09 63.9 68 64.7
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 5.4e-09 63.9 68 60.3
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 5.4e-09 63.9 68 64.7
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.6e-08 62.4 68 57.4
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 2.7e-08 61.6 68 58.8
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 5.9e-08 60.5 68 69.1
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 5.9e-08 60.5 68 64.7
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 7.7e-08 60.1 68 58.8
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 1.7e-07 58.9 68 57.4
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 2.3e-07 58.5 68 55.9
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 2.9e-07 58.2 58 62.1
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 3.8e-07 57.8 69 55.1
FAN23G2194 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.8e-07 57.8 69 55.1
Phvul.004G173101 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 3.8e-07 57.8 68 54.4
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea HOM05D001384 ORTHO05D001215 6.6e-07 57.0 68 52.9
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea HOM05D001384 ORTHO05D001215 6.6e-07 57.0 68 52.9
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 6.6e-07 57.0 69 53.6
RcHm_v2.0_Chr1g0380071 Rosa chinensis HOM05D001384 ORTHO05D001215 8.6e-07 56.6 59 50.8
Lalb_Chr24g0393961 Lupinus albus HOM05D001384 ORTHO05D001215 1.5e-06 55.8 68 55.9
HanXRQChr10g0319041 Helianthus annuus HOM05D001384 ORTHO05D001215 1.9e-06 55.5 68 52.9
MBI01_g10310_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 1.9e-06 55.5 68 63.2
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 2.5e-06 55.1 68 64.7
Medtr6g090535 Medicago truncatula HOM05D001384 ORTHO05D001215 3.3e-06 54.7 68 52.9
CiPaw.03G220500 Carya illinoinensis HOM05D001384 ORTHO05D001215 5.5e-06 53.9 69 56.5
FAN28G1521 Fragaria x ananassa HOM05D001384 ORTHO05D001215 7.2e-06 53.5 69 52.2
Migut.K00567 Erythranthe guttata HOM05D001384 ORTHO05D001215 9.5e-06 53.1 68 60.3


User provided reference genes

Program Settings