Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.3e-31 139.0 68 100.0
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.1e-29 131.7 64 98.4
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 8.8e-28 126.3 65 92.3
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 2.0e-27 125.2 68 88.2
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 2.6e-27 124.8 68 86.8
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 2.6e-27 124.8 65 89.2
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 4.4e-27 124.0 65 87.7
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 4.4e-27 124.0 65 90.8
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 9.7e-27 122.9 68 86.8
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.7e-26 122.1 69 88.4
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 1.7e-26 122.1 65 86.2
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.2e-26 121.7 69 88.4
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.2e-26 121.7 69 88.4
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.2e-26 121.7 69 88.4
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.8e-26 121.3 68 85.3
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 2.8e-26 121.3 68 85.3
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 2.8e-26 121.3 68 83.8
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.8e-26 121.3 68 83.8
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 4.8e-26 120.6 65 86.2
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 4.8e-26 120.6 67 85.1
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 4.8e-26 120.6 65 86.2
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 6.3e-26 120.2 68 85.3
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 8.2e-26 119.8 68 82.4
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 1.1e-25 119.4 65 84.6
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.1e-25 119.4 68 83.8
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 1.4e-25 119.0 65 86.2
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 1.4e-25 119.0 69 87.0
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 1.8e-25 118.6 65 84.6
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 4.1e-25 117.5 68 83.8
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 5.3e-25 117.1 68 85.3
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 5.3e-25 117.1 67 83.6
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 7.0e-25 116.7 65 83.1
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 9.1e-25 116.3 65 81.5
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 9.1e-25 116.3 65 84.6
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 1.2e-24 115.9 65 86.2
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 1.6e-24 115.5 68 79.4
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 1.6e-24 115.5 68 82.4
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 2.0e-24 115.2 65 81.5
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.0e-24 115.2 68 80.9
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 2.6e-24 114.8 68 80.9
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 3.5e-24 114.4 65 83.1
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 5.9e-24 113.6 65 80.0
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 5.9e-24 113.6 68 82.4
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 5.9e-24 113.6 68 82.4
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 5.9e-24 113.6 68 77.9
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 1.0e-23 112.8 67 80.6
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 1.0e-23 112.8 68 79.4
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 1.3e-23 112.5 67 76.1
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.2e-23 111.7 65 81.5
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 2.9e-23 111.3 67 80.6
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 3.8e-23 110.9 65 80.0
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 5.0e-23 110.5 65 80.0
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 5.0e-23 110.5 65 80.0
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 5.0e-23 110.5 65 80.0
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 5.0e-23 110.5 67 79.1
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 5.0e-23 110.5 68 77.9
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 6.5e-23 110.2 65 80.0
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 8.5e-23 109.8 67 79.1
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 8.5e-23 109.8 62 82.3
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 4.2e-22 107.5 57 86.0
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 7.2e-22 106.7 65 78.5
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 1.2e-21 105.9 68 75.0
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.0e-20 102.8 68 73.5
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 1.0e-20 102.8 65 75.4
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 1.4e-20 102.4 64 75.0
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 3.0e-20 101.3 116 50.9
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 4.0e-20 100.9 65 70.8
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 2.0e-19 98.6 65 69.2
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 7.5e-19 96.7 65 73.8
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 3.7e-18 94.4 68 70.6
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 2.2e-15 85.1 68 58.8
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.9e-15 84.7 54 75.9
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 7.2e-14 80.1 68 57.4
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 2.2e-10 68.6 42 73.8
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 3.1e-09 64.7 64 45.3
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 3.5e-08 61.2 62 45.2
vmacro06124 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 4.2e-06 54.3 28 82.1


User provided reference genes

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