Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002624 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D109156 4.2e-141 504.6 242 100.0
CSS0012964 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006683 4.1e-35 152.5 85 88.2
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 7.5e-21 105.1 80 66.2
Dinv20211 Davidia involucrata HOM05D000070 ORTHO05D006683 9.8e-21 104.8 85 58.8
Actinidia35238 Actinidia chinensis HOM05D000070 ORTHO05D006683 3.7e-20 102.8 85 60.0
Hma1.2p1_0416F.1_g148470 Hydrangea macrophylla HOM05D000070 ORTHO05D006683 7.5e-13 78.6 86 47.7
Dinv14946 Davidia involucrata HOM05D000070 ORTHO05D006683 9.2e-11 71.6 85 45.9
CSS0003392 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D001347 1.6e-10 70.9 65 61.5
Manes.15G090100 Manihot esculenta HOM05D000070 ORTHO05D006683 2.9e-09 66.6 86 50.0
Duzib213G1081 Durio zibethinus HOM05D000070 ORTHO05D006683 5.6e-08 62.4 85 44.7
Gohir.D08G032300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 2.8e-07 60.1 87 46.0
Gorai.004G029700 Gossypium raimondii HOM05D000070 ORTHO05D006683 2.8e-07 60.1 87 46.0
Dinv17266 Davidia involucrata HOM05D001165 ORTHO05D001347 3.6e-07 59.7 32 81.2
Gohir.D01G047300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 6.1e-07 58.9 156 32.1
Gorai.002G066800 Gossypium raimondii HOM05D000070 ORTHO05D006683 6.1e-07 58.9 156 32.1
Atru.chr2.2387 Acer truncatum HOM05D000070 ORTHO05D006683 8.0e-07 58.5 156 32.1
Gohir.A01G060800 Gossypium hirsutum HOM05D000070 ORTHO05D006683 8.0e-07 58.5 156 32.1
TAR624G0583 Trochodendron aralioides HOM05D000070 ORTHO05D006683 8.0e-07 58.5 85 38.8
Lj1A837G48 Lonicera japonica HOM05D000070 ORTHO05D006683 1.4e-06 57.8 86 38.4
EL10Ac5g11989 Beta vulgaris HOM05D001165 ORTHO05D001347 1.8e-06 57.4 32 75.0
Sabra03G0068000 Salix brachista HOM05D001165 ORTHO05D001347 1.8e-06 57.4 40 62.5
Prupe.4G173800 Prunus persica HOM05D000070 ORTHO05D006683 2.3e-06 57.0 86 39.5
Potri.003G100000 Populus trichocarpa HOM05D001165 ORTHO05D001347 3.0e-06 56.6 40 62.5
PGR031G1844 Punica granatum HOM05D001165 ORTHO05D001347 3.0e-06 56.6 103 36.9
FAN16G3451 Fragaria x ananassa HOM05D000070 ORTHO05D006683 4.0e-06 56.2 95 38.9
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 4.0e-06 56.2 32 78.1
Hma1.2p1_0635F.1_g193190 Hydrangea macrophylla HOM05D001165 ORTHO05D001347 6.8e-06 55.5 32 68.8
FAN11G2237 Fragaria x ananassa HOM05D000070 ORTHO05D006683 8.9e-06 55.1 94 37.2


User provided reference genes

Program Settings