Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002615 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.1e-76 288.9 141 100.0
CSS0041486 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.7e-55 218.8 139 80.6
CSS0025043 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.9e-55 217.2 141 80.9
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.9e-55 217.2 112 95.5
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.9e-54 214.9 110 96.4
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.9e-54 214.9 110 96.4
CSS0030035 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.7e-54 213.8 141 78.7
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.6e-53 211.1 110 94.5
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.4e-51 206.5 110 92.7
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 1.5e-45 186.4 110 79.1
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 5.6e-45 184.5 110 80.0
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 9.6e-45 183.7 110 80.0
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 6.2e-44 181.0 111 78.4
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.0e-43 178.3 110 79.1
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.0e-43 178.3 110 79.1
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 5.3e-43 177.9 110 77.3
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 1.2e-42 176.8 110 78.2
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 2.6e-42 175.6 110 77.3
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 3.4e-42 175.3 110 78.2
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 4.5e-42 174.9 110 77.3
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 4.5e-42 174.9 110 77.3
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 5.8e-42 174.5 110 77.3
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 5.8e-42 174.5 110 75.5
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 1.4e-40 169.9 110 72.7
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 1.9e-40 169.5 110 71.8
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.9e-40 169.5 110 75.5
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 2.5e-40 169.1 110 74.5
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 3.2e-40 168.7 110 74.5
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 3.2e-40 168.7 110 74.5
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 3.2e-40 168.7 110 74.5
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 4.2e-40 168.3 110 74.5
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 7.1e-40 167.5 110 72.7
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 9.3e-40 167.2 110 74.5
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 1.2e-39 166.8 124 66.9
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 1.6e-39 166.4 110 73.6
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.6e-39 166.4 110 74.5
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.6e-39 166.4 110 73.6
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 2.1e-39 166.0 110 70.9
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 3.5e-39 165.2 110 70.9
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 4.6e-39 164.9 110 71.8
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 4.6e-39 164.9 110 71.8
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 1.0e-38 163.7 110 73.6
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 1.3e-38 163.3 110 72.7
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.8e-38 162.9 110 73.6
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 3.0e-38 162.2 110 72.7
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 3.9e-38 161.8 110 72.7
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 3.9e-38 161.8 110 70.9
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 5.1e-38 161.4 110 70.9
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 5.1e-38 161.4 110 73.6
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 6.7e-38 161.0 110 70.0
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 1.1e-37 160.2 110 70.0
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 1.5e-37 159.8 110 69.1
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 1.9e-37 159.5 110 71.8
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 1.9e-37 159.5 110 72.7
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 1.9e-37 159.5 110 69.1
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 2.5e-37 159.1 110 69.1
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 2.5e-37 159.1 107 70.1
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 3.3e-37 158.7 110 69.1
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 3.3e-37 158.7 109 67.0
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 5.7e-37 157.9 110 69.1
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 5.7e-37 157.9 110 70.9
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 9.6e-37 157.1 130 62.3
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 1.3e-36 156.8 109 65.1
TPR.G22047 Trifolium pratense HOM05D003515 ORTHO05D004347 2.1e-36 156.0 110 72.7
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 2.8e-36 155.6 133 57.1
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 3.7e-36 155.2 110 70.9
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 4.8e-36 154.8 110 68.2
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 8.2e-36 154.1 110 71.8
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 1.1e-35 153.7 110 70.9
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 1.4e-35 153.3 129 61.2
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.4e-35 153.3 110 69.1
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 1.4e-35 153.3 132 53.8
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.8e-35 152.9 109 66.1
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 2.4e-35 152.5 129 61.2
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 2.4e-35 152.5 129 61.2
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 3.1e-35 152.1 107 65.4
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 3.1e-35 152.1 110 67.3
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 4.1e-35 151.8 110 70.9
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 6.9e-35 151.0 110 67.3
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 9.0e-35 150.6 130 60.8
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.2e-34 150.2 120 61.7
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 2.0e-34 149.4 129 59.7
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 2.6e-34 149.1 110 66.4
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 3.4e-34 148.7 110 66.4
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 7.6e-34 147.5 130 60.0
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 7.6e-34 147.5 130 60.0
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 1.3e-33 146.7 110 69.1
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 1.3e-33 146.7 110 68.2
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 1.7e-33 146.4 130 60.8
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 2.2e-33 146.0 110 65.5
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 2.9e-33 145.6 110 68.2
Ah.15g091880 Amaranthus hybridus HOM05D003515 ORTHO05D004347 5.0e-33 144.8 137 54.0
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 6.5e-33 144.4 111 66.7
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 8.5e-33 144.1 130 59.2
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 5.5e-32 141.4 110 65.5
Zm00001eb152650 Zea mays HOM05D003515 ORTHO05D004347 1.6e-31 139.8 110 65.5
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 2.7e-31 139.0 110 64.5
MSTRG.2876 Avicennia marina HOM05D003515 ORTHO05D004347 6.1e-31 137.9 110 60.9
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 1.1e-29 133.7 130 52.3
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 1.9e-29 132.9 109 62.4
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 4.3e-29 131.7 110 60.0
CDE06G0149 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 7.4e-29 131.0 109 59.6
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 1.6e-28 129.8 109 62.4
Sopen01g017590 Solanum pennellii HOM05D003515 ORTHO05D004347 1.5e-26 123.2 92 66.3
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 2.6e-26 122.5 157 45.9
SHI28056 Sapria himalayana HOM05D003515 ORTHO05D004347 7.7e-26 120.9 107 55.1
Phvul.007G100966 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 1.0e-25 120.6 81 70.4
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 6.1e-23 111.3 111 54.1
arahy.Tifrunner.gnm1.ann1.E07S37 Arachis hypogaea HOM05D003509 ORTHO05D001340 1.4e-19 100.1 70 67.1
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 9.1e-19 97.4 114 45.6
Cpa.g.sc30.108 Carica papaya HOM05D003515 ORTHO05D010193 2.5e-16 89.4 73 60.3
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 6.1e-15 84.7 111 46.8
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 3.0e-14 82.4 115 40.0
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 4.8e-12 75.1 118 39.0
Psat7g087520 Pisum sativum HOM05D003515 ORTHO05D004347 4.2e-08 62.0 42 71.4


User provided reference genes

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