Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 9.8e-118 426.8 212 100.0
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 2.5e-105 385.6 217 88.9
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.8e-103 379.4 212 90.1
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.5e-102 376.3 214 88.8
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 8.3e-101 370.5 217 83.9
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 8.1e-96 354.0 222 80.6
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 4.0e-95 351.7 222 78.4
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 8.9e-95 350.5 222 79.3
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 6.4e-93 344.4 223 76.2
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 3.2e-92 342.0 214 80.8
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 1.6e-91 339.7 214 80.4
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 1.6e-91 339.7 190 86.3
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 6.0e-91 337.8 214 79.9
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 2.3e-90 335.9 222 79.3
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 3.9e-90 335.1 219 76.7
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 6.6e-90 334.3 202 79.7
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 1.5e-89 333.2 220 73.6
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.9e-89 332.8 221 75.1
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 2.5e-89 332.4 189 86.8
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 2.5e-89 332.4 196 83.2
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.5e-89 332.4 213 77.5
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 2.5e-89 332.4 213 76.1
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 4.3e-89 331.6 222 77.5
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 5.6e-89 331.3 212 78.3
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 7.3e-89 330.9 214 79.9
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 7.3e-89 330.9 217 78.3
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.3e-88 330.1 212 77.8
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.3e-88 330.1 201 83.1
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 1.6e-88 329.7 213 77.9
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 1.6e-88 329.7 213 77.9
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 1.1e-87 327.0 213 77.0
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 1.4e-87 326.6 214 78.0
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.8e-87 326.2 197 80.2
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 1.8e-87 326.2 190 82.6
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 2.4e-87 325.9 212 78.8
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 3.1e-87 325.5 213 76.5
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 4.0e-87 325.1 212 74.1
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 5.3e-87 324.7 213 76.5
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 9.0e-87 323.9 207 78.7
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 2.0e-86 322.8 212 77.8
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 2.0e-86 322.8 207 78.3
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 4.4e-86 321.6 202 79.7
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 1.3e-85 320.1 196 82.1
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 1.3e-85 320.1 211 76.8
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.3e-85 320.1 218 75.7
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 1.7e-85 319.7 215 74.0
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.2e-85 319.3 215 75.3
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 2.9e-85 318.9 211 74.4
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 3.8e-85 318.5 216 72.2
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 8.4e-85 317.4 212 76.4
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 2.4e-84 315.8 189 78.8
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 5.4e-84 314.7 191 82.7
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 1.2e-83 313.5 219 75.3
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 2.7e-83 312.4 214 73.8
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 1.3e-82 310.1 199 76.9
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 6.6e-82 307.8 199 76.4
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 8.7e-82 307.4 192 79.7
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.5e-81 306.6 212 74.5
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 3.3e-81 305.4 179 83.2
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 7.3e-81 304.3 199 75.4
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 1.3e-80 303.5 213 73.2
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.3e-80 303.5 192 78.1
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 8.1e-80 300.8 199 74.4
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 8.1e-80 300.8 197 76.1
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.8e-79 299.7 190 76.8
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 4.0e-79 298.5 207 72.5
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 2.0e-78 296.2 202 73.3
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 2.6e-78 295.8 179 78.8
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 3.4e-78 295.4 205 72.2
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 4.5e-78 295.0 217 69.6
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 3.8e-77 292.0 189 73.5
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 3.8e-77 292.0 188 76.1
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 3.8e-77 292.0 197 73.1
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 1.1e-76 290.4 193 73.1
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 1.4e-76 290.0 182 75.3
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 1.4e-76 290.0 199 73.4
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 1.4e-76 290.0 187 75.9
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 4.2e-76 288.5 188 74.5
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 7.1e-76 287.7 197 74.1
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 1.8e-74 283.1 227 67.0
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 2.3e-74 282.7 199 72.9
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 3.9e-74 282.0 227 67.4
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 5.1e-74 281.6 195 71.3
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 1.9e-73 279.6 175 76.6
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 2.5e-73 279.3 170 79.4
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 2.5e-73 279.3 170 79.4
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 3.3e-73 278.9 170 78.8
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 3.3e-73 278.9 216 67.6
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.3e-73 278.9 227 65.6
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 3.3e-73 278.9 299 50.8
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 4.3e-73 278.5 170 78.8
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 5.6e-73 278.1 170 78.8
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 5.6e-73 278.1 170 78.8
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 7.4e-73 277.7 194 71.1
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 9.6e-73 277.3 169 78.7
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-72 276.9 170 78.2
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 1.6e-72 276.6 170 78.2
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 2.1e-72 276.2 169 78.1
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 3.7e-72 275.4 170 76.5
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 2.4e-71 272.7 170 77.6
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 2.4e-71 272.7 170 77.6
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 2.4e-71 272.7 170 77.6
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 3.1e-71 272.3 189 72.0
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 5.3e-71 271.6 199 66.8
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 9.0e-71 270.8 174 76.4
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 3.4e-70 268.9 190 70.0
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 4.5e-70 268.5 203 66.0
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 5.8e-70 268.1 240 60.0
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 6.5e-69 264.6 241 59.8
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 1.1e-68 263.8 240 59.2
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.4e-68 263.5 190 68.4
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 9.3e-68 260.8 286 51.4
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.1e-65 253.8 188 66.5
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 2.0e-62 243.0 152 80.3
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 1.0e-61 240.7 201 66.2
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 8.4e-61 237.7 213 59.2
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 3.2e-60 235.7 218 57.8
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 1.6e-59 233.4 218 57.3
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 1.9e-57 226.5 211 57.8
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 1.9e-57 226.5 122 91.0
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 3.3e-57 225.7 151 73.5
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.2e-56 223.0 148 75.0
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 4.8e-56 221.9 146 77.4
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 9.0e-55 217.6 147 74.8
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 5.0e-53 211.8 170 60.0
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 2.5e-52 209.5 141 70.2
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 3.2e-52 209.1 152 72.4
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 3.1e-47 192.6 131 72.5
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 2.9e-45 186.0 151 65.6
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 5.1e-42 175.3 139 65.5
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 6.7e-42 174.9 173 54.9
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 3.2e-36 156.0 108 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 7.2e-36 154.8 131 58.0
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 9.4e-36 154.5 113 63.7
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 3.6e-35 152.5 105 63.8
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 5.7e-33 145.2 94 74.5
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 9.7e-33 144.4 92 75.0
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 7.7e-30 134.8 138 54.3
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 7.7e-30 134.8 138 54.3
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 7.5e-25 118.2 99 64.6
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.7e-24 117.1 88 68.2
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 5.9e-22 108.6 90 58.9
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 8.0e-19 98.2 67 71.6
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 5.2e-18 95.5 59 76.3
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.7e-16 90.5 76 55.3
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.5e-12 77.4 175 36.0
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 9.5e-12 74.7 54 61.1
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 1.8e-10 70.5 45 64.4
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.2e-09 67.8 48 66.7


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