Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002595 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 4.4e-77 291.2 146 100.0
CSS0018883 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 4.5e-61 238.0 126 93.7
Actinidia23749 Actinidia chinensis HOM05D000576 ORTHO05D000368 8.5e-20 100.9 105 53.3
Actinidia24869 Actinidia chinensis HOM05D021695 ORTHO05D013658 4.8e-15 85.1 103 47.6
Hma1.2p1_0418F.1_g149130 Hydrangea macrophylla HOM05D021695 ORTHO05D013658 2.1e-10 69.7 88 45.5
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 3.0e-09 65.9 90 41.1
Rhsim01G0265600 Rhododendron simsii HOM05D008923 ORTHO05D010536 4.0e-09 65.5 69 53.6
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 1.5e-08 63.5 86 38.4
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.0e-08 63.2 84 40.5
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 2.6e-08 62.8 83 39.8
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.4e-08 62.0 81 40.7
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 9.7e-08 60.8 85 38.8
QL10p005844 Quercus lobata HOM05D021695 ORTHO05D013658 1.7e-07 60.1 84 42.9
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.7e-07 60.1 80 42.5
FAN19G1792 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.2e-07 59.7 99 36.4
Peaxi162Scf00304g00831 Petunia axillaris HOM05D000576 ORTHO05D000368 3.7e-07 58.9 91 29.7
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 4.8e-07 58.5 83 38.6
COL.COLO4_37414 Corchorus olitorius HOM05D021695 ORTHO05D013658 8.2e-07 57.8 85 38.8
HanXRQChr09g0251901 Helianthus annuus HOM05D000576 ORTHO05D000368 8.2e-07 57.8 83 34.9
FvH4_1g04280 Fragaria vesca HOM05D000576 ORTHO05D000368 1.1e-06 57.4 92 32.6
Peaxi162Scf00340g00318 Petunia axillaris HOM05D000576 ORTHO05D000368 1.1e-06 57.4 79 38.0
COL.COLO4_25983 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.4e-06 57.0 101 34.7
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 1.4e-06 57.0 88 35.2
COL.COLO4_25985 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.8e-06 56.6 94 33.0
Dinv38540 Davidia involucrata HOM05D000576 ORTHO05D013658 1.8e-06 56.6 99 32.3
ECA233G4739 Erigeron canadensis HOM05D000576 ORTHO05D000368 1.8e-06 56.6 92 35.9
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 1.8e-06 56.6 92 35.9
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 1.8e-06 56.6 98 37.8
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 2.4e-06 56.2 95 36.8
Migut.J00163 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-06 56.2 79 38.0
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.4e-06 56.2 92 32.6
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 4.1e-06 55.5 84 39.3
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.1e-06 55.5 92 32.6
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 5.3e-06 55.1 96 34.4
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 5.3e-06 55.1 96 37.5
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 5.3e-06 55.1 99 32.3
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.0e-06 54.7 87 35.6
HanXRQChr09g0252871 Helianthus annuus HOM05D000576 ORTHO05D000368 7.0e-06 54.7 98 30.6
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 7.0e-06 54.7 88 34.1
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 7.0e-06 54.7 99 32.3
Manes.11G129716 Manihot esculenta HOM05D000576 ORTHO05D000368 7.0e-06 54.7 89 36.0
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 9.1e-06 54.3 94 31.9
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.1e-06 54.3 80 33.8
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.1e-06 54.3 103 34.0
Manes.11G129800 Manihot esculenta HOM05D000576 ORTHO05D000368 9.1e-06 54.3 89 36.0


User provided reference genes

Program Settings