Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.9e-150 535.8 267 100.0
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 4.1e-121 438.3 278 79.1
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 9.1e-121 437.2 278 79.9
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 3.8e-119 431.8 279 77.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 2.4e-113 412.5 278 76.6
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.6e-112 409.8 273 76.2
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 3.9e-111 405.2 249 80.3
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 4.9e-106 388.3 276 70.7
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 4.1e-105 385.2 279 69.9
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.7e-104 382.5 282 72.3
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 3.5e-104 382.1 278 70.1
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.0e-103 380.6 278 70.1
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.0e-103 380.6 278 71.9
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.7e-103 379.8 256 73.8
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.3e-103 379.4 268 73.1
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.1e-102 377.1 271 70.5
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.9e-102 376.3 273 71.1
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 7.3e-102 374.4 278 71.2
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 9.5e-102 374.0 220 83.6
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 2.1e-101 372.9 278 68.0
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 2.8e-101 372.5 275 70.5
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 2.8e-101 372.5 269 69.9
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 4.7e-101 371.7 250 75.2
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 4.7e-101 371.7 275 70.2
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 8.1e-101 370.9 273 70.7
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.4e-100 370.2 228 78.9
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.1e-100 369.0 273 69.2
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 2.6e-99 365.9 275 70.5
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.6e-99 365.9 233 76.4
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 4.4e-99 365.2 278 66.9
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 4.4e-99 365.2 276 69.9
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.5e-99 364.4 278 66.5
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 7.5e-99 364.4 222 79.7
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 9.8e-99 364.0 242 76.9
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 2.2e-98 362.8 275 69.5
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.9e-98 362.5 224 80.8
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 8.3e-98 360.9 275 68.4
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 8.3e-98 360.9 276 70.3
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.4e-97 360.1 250 73.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 2.4e-97 359.4 298 64.4
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 2.4e-97 359.4 276 67.8
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 4.1e-97 358.6 225 79.1
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 4.1e-97 358.6 283 68.2
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 9.2e-97 357.5 278 66.5
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.2e-96 357.1 269 69.9
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.2e-96 357.1 276 66.7
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.6e-96 356.7 274 67.2
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 2.1e-96 356.3 224 78.6
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.1e-96 356.3 276 67.0
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.7e-96 355.9 269 69.5
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.5e-96 355.5 267 70.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.5e-96 355.5 264 68.9
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.6e-96 355.1 267 70.8
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.8e-96 354.4 258 71.3
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.3e-95 353.6 233 74.7
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 3.0e-95 352.4 268 69.8
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.1e-94 350.5 265 69.1
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.5e-94 350.1 280 67.5
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 4.3e-94 348.6 271 69.0
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.3e-94 348.6 272 68.4
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 7.3e-94 347.8 279 64.9
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 1.2e-93 347.1 224 75.4
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 3.6e-93 345.5 245 71.4
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 6.2e-93 344.7 283 65.4
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 8.1e-93 344.4 282 64.5
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 3.1e-92 342.4 252 68.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.9e-92 340.9 271 66.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.5e-91 340.1 242 72.3
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.5e-91 340.1 297 62.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.0e-91 339.7 278 64.7
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 2.6e-91 339.3 280 66.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 7.6e-91 337.8 188 85.6
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 9.9e-91 337.4 209 79.4
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 4.9e-90 335.1 270 66.3
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 6.4e-90 334.7 231 73.6
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 2.7e-88 329.3 268 62.7
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.3e-87 327.0 278 63.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.3e-87 327.0 224 73.7
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.3e-87 327.0 290 59.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 3.0e-87 325.9 277 63.9
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 8.6e-87 324.3 200 79.5
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.9e-86 323.2 183 83.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.2e-85 320.5 272 60.7
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.2e-85 320.5 200 77.5
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.8e-85 319.3 279 62.0
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 8.1e-85 317.8 278 62.6
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 8.1e-85 317.8 278 62.6
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 8.1e-85 317.8 278 62.6
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 8.1e-85 317.8 190 81.1
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 2.4e-84 316.2 199 78.4
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.0e-83 313.2 226 69.0
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 4.4e-83 312.0 194 77.8
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 7.1e-81 304.7 273 64.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 6.0e-80 301.6 213 70.0
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 9.6e-78 294.3 216 65.7
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 9.0e-76 287.7 262 60.3
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.5e-75 287.0 262 60.3
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.8e-74 282.3 166 80.7
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.8e-74 282.3 240 59.6
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 4.6e-64 248.8 207 59.4
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 3.7e-61 239.2 187 60.4
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.1e-52 209.5 121 84.3
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 3.4e-51 206.1 140 71.4
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 5.5e-49 198.7 180 55.0
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 5.7e-46 188.7 103 84.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.0e-35 153.7 93 79.6
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 9.7e-30 134.8 81 81.5
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 3.1e-28 129.8 159 49.7
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.6e-24 117.5 79 69.6
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 6.1e-24 115.5 86 64.0
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.4e-15 87.8 152 32.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.8e-13 80.1 87 46.0
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 3.8e-10 69.7 175 30.3
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 9.4e-09 65.1 35 91.4
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 8.8e-07 58.5 113 43.4


User provided reference genes

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