Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 3.9e-111 404.8 206 100.0
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 4.9e-82 308.1 206 79.1
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.1e-81 307.0 206 78.2
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 4.2e-81 305.1 206 75.7
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 4.2e-81 305.1 206 79.1
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 1.2e-72 276.9 198 71.7
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 6.1e-72 274.6 206 68.4
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 2.2e-69 266.2 199 69.8
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 8.2e-69 264.2 199 68.3
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 9.1e-68 260.8 200 68.0
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 2.7e-64 249.2 199 64.8
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 1.0e-63 247.3 188 67.6
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 6.7e-63 244.6 185 67.6
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 3.3e-62 242.3 164 73.2
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 1.3e-61 240.4 188 64.4
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 4.8e-61 238.4 188 64.9
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 4.8e-61 238.4 199 63.8
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.2e-59 233.8 194 61.9
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 1.5e-59 233.4 200 64.5
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 2.6e-59 232.6 178 72.5
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 3.4e-59 232.3 206 61.2
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 5.9e-59 231.5 186 65.1
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 7.7e-59 231.1 181 65.2
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 7.7e-59 231.1 189 63.5
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 7.7e-59 231.1 189 63.5
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 7.7e-59 231.1 206 59.7
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 7.7e-59 231.1 198 62.6
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 1.3e-58 230.3 193 62.2
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 3.8e-58 228.8 186 64.5
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 3.8e-58 228.8 203 59.6
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 6.5e-58 228.0 199 63.3
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.1e-57 227.3 211 58.3
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 1.4e-57 226.9 202 58.9
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 5.5e-57 224.9 283 47.0
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 9.4e-57 224.2 188 61.7
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.6e-56 223.4 199 59.3
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 6.1e-56 221.5 176 66.5
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 7.9e-56 221.1 201 59.7
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 1.4e-55 220.3 177 65.0
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 5.2e-55 218.4 197 57.9
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 8.8e-55 217.6 164 66.5
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 2.0e-54 216.5 200 58.5
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 2.0e-54 216.5 183 61.7
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 2.0e-54 216.5 165 64.2
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 3.3e-54 215.7 201 57.7
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 3.3e-54 215.7 198 59.6
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 4.4e-54 215.3 185 60.0
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 5.7e-54 214.9 202 57.9
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 7.4e-54 214.5 202 60.9
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 9.7e-54 214.2 200 58.0
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 9.7e-54 214.2 198 55.6
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 9.7e-54 214.2 196 58.7
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 9.7e-54 214.2 196 58.7
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 9.7e-54 214.2 196 58.7
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.3e-53 213.8 198 56.1
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 1.3e-53 213.8 151 70.2
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 1.3e-53 213.8 197 58.9
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 1.3e-53 213.8 202 56.4
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 2.2e-53 213.0 174 64.9
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 6.3e-53 211.5 181 60.8
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 8.2e-53 211.1 182 58.2
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 1.1e-52 210.7 201 57.2
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.4e-52 210.3 200 57.0
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 2.4e-52 209.5 198 58.1
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 2.4e-52 209.5 185 58.9
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 3.1e-52 209.1 176 61.9
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 1.6e-51 206.8 156 66.0
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 2.0e-51 206.5 163 66.3
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 2.0e-51 206.5 209 55.0
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 3.5e-51 205.7 197 57.9
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 5.9e-51 204.9 198 57.1
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 7.7e-51 204.5 176 61.9
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 3.8e-50 202.2 162 62.3
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 8.5e-50 201.1 166 63.3
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.1e-49 200.7 162 63.0
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 1.9e-49 199.9 182 56.6
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 4.2e-49 198.7 196 60.2
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 4.2e-49 198.7 190 54.2
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 7.2e-49 198.0 176 59.7
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 2.1e-48 196.4 184 55.4
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.7e-48 196.1 154 65.6
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 4.7e-48 195.3 182 55.5
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.4e-47 193.7 184 53.8
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.8e-47 193.4 184 55.4
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 4.0e-47 192.2 185 55.1
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 8.8e-47 191.0 183 55.2
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 8.8e-47 191.0 139 69.1
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 1.2e-46 190.7 182 57.1
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 1.5e-46 190.3 181 56.9
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 1.3e-45 187.2 200 52.0
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 2.8e-45 186.0 182 55.5
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.4e-44 183.0 182 52.7
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 3.1e-44 182.6 156 59.6
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 4.1e-44 182.2 201 52.7
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 5.9e-43 178.3 164 56.1
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 2.2e-42 176.4 183 53.0
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 2.9e-42 176.0 144 63.2
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.9e-41 173.3 119 73.1
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.2e-40 170.6 193 51.8
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 3.6e-40 169.1 169 52.7
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 4.0e-39 165.6 198 48.5
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 1.2e-38 164.1 144 60.4
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 2.2e-37 159.8 142 59.9
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 3.7e-37 159.1 128 63.3
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 3.5e-35 152.5 181 51.4
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.3e-34 150.6 130 58.5
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.7e-34 150.2 191 47.1
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 2.9e-34 149.4 140 56.4
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 5.0e-34 148.7 140 58.6
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 4.2e-33 145.6 121 61.2
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 5.5e-33 145.2 168 50.6
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 1.4e-31 140.6 122 59.8
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 3.0e-31 139.4 170 48.8
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 4.4e-30 135.6 178 47.8
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 4.4e-30 135.6 178 47.8
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.4e-28 130.6 111 60.4
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 4.5e-27 125.6 130 56.2
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 6.6e-26 121.7 142 50.0
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 8.6e-26 121.3 109 56.0
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.9e-25 120.2 109 61.5
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 4.3e-25 119.0 133 53.4
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 5.6e-25 118.6 188 38.8
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 4.0e-23 112.5 179 41.9
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 6.4e-21 105.1 88 61.4
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 4.1e-20 102.4 91 59.3
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 2.5e-17 93.2 84 58.3
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 2.1e-16 90.1 73 63.0
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 5.8e-14 82.0 73 58.9
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 5.4e-12 75.5 96 49.0
Sc09g0009520 Simmondsia chinensis HOM05D005768 ORTHO05D007100 3.9e-10 69.3 65 53.8
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 6.6e-10 68.6 69 52.2
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 9.5e-09 64.7 137 40.9
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 6.2e-08 62.0 59 49.2
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-07 59.3 166 29.5


User provided reference genes

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