Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002536 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 7.1e-191 670.6 386 100.0
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.4e-74 283.5 457 48.1
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 3.0e-72 276.6 445 44.5
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 2.5e-63 246.9 289 59.5
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 7.9e-57 225.3 442 39.4
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 3.0e-56 223.4 442 40.3
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.9e-56 223.0 465 41.9
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 8.7e-56 221.9 469 42.6
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 9.7e-55 218.4 448 41.1
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 1.8e-53 214.2 452 35.8
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 9.0e-53 211.8 440 38.0
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.0e-51 208.4 436 37.8
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 2.2e-51 207.2 452 36.9
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 5.5e-50 202.6 435 40.7
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 5.5e-50 202.6 452 36.7
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 5.5e-50 202.6 443 37.2
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 5.5e-50 202.6 448 38.2
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 2.7e-49 200.3 434 42.2
Lj2A196T48 Lonicera japonica HOM05D002977 ORTHO05D003225 1.0e-48 198.4 306 50.0
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.3e-48 197.2 448 37.9
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 3.0e-48 196.8 471 35.5
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 1.5e-47 194.5 429 34.5
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.3e-47 193.0 425 38.1
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 7.4e-47 192.2 425 38.1
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.7e-46 191.0 425 39.8
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.2e-46 190.7 444 36.9
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 6.3e-46 189.1 457 33.9
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 6.9e-45 185.7 420 39.0
GSVIVG01019863001 Vitis vinifera HOM05D002977 ORTHO05D003225 1.0e-43 181.8 239 49.4
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 4.2e-42 176.4 433 36.3
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 1.6e-41 174.5 449 33.4
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 2.7e-41 173.7 444 34.5
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.8e-40 171.0 465 37.4
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 3.0e-40 170.2 427 36.8
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 2.0e-39 167.5 419 36.3
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 5.7e-39 166.0 446 33.2
HanXRQChr07g0188421 Helianthus annuus HOM05D002977 ORTHO05D003225 5.7e-39 166.0 441 33.1
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 2.2e-38 164.1 476 34.0
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 1.4e-37 161.4 447 34.7
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 1.8e-37 161.0 450 32.0
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.8e-37 161.0 450 32.9
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.8e-37 161.0 444 34.2
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.8e-37 161.0 461 32.5
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.4e-37 160.6 441 33.8
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 1.5e-36 157.9 358 37.2
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 2.6e-36 157.1 457 31.9
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 4.5e-36 156.4 454 34.6
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.5e-36 156.4 449 32.5
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 5.9e-36 156.0 415 32.5
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.5e-34 150.6 440 31.6
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 4.2e-34 149.8 413 33.7
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 7.2e-34 149.1 472 31.6
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.6e-33 147.9 432 32.6
Sed0005409 Sechium edule HOM05D002977 ORTHO05D003225 1.8e-32 144.4 413 33.2
Ciclev10023936m.g Citrus clementina HOM05D002977 ORTHO05D003225 2.3e-32 144.1 156 55.1
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 3.9e-32 143.3 448 32.4
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.4e-31 139.8 293 41.6
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 9.7e-31 138.7 432 31.2
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.3e-30 138.3 453 31.8
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.7e-30 136.7 307 40.1
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 3.7e-30 136.7 470 34.3
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.4e-29 134.0 418 32.1
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.4e-29 134.0 418 32.1
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 5.3e-29 132.9 465 33.1
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 5.3e-29 132.9 308 39.6
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 9.1e-29 132.1 417 33.3
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 2.0e-28 131.0 428 29.2
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 3.5e-28 130.2 414 31.2
Aa31LG9G10650 Aethionema arabicum HOM05D002977 ORTHO05D003225 6.5e-27 125.9 444 29.3
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 8.5e-27 125.6 407 31.7
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 3.2e-26 123.6 429 29.1
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 3.2e-26 123.6 422 29.6
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 4.2e-26 123.2 396 31.8
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 4.2e-26 123.2 396 31.8
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 5.5e-26 122.9 460 28.5
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 7.2e-26 122.5 467 30.8
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.7e-25 120.6 435 28.0
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 3.6e-25 120.2 430 29.1
Lsat_1_v5_gn_3_5860 Lactuca sativa HOM05D002524 ORTHO05D002718 4.7e-25 119.8 432 34.5
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.0e-24 118.6 395 30.9
THA.LOC104806370 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 3.0e-24 117.1 450 31.8
ECA246G0913 Erigeron canadensis HOM05D002977 ORTHO05D003225 6.7e-24 115.9 463 29.2
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 8.8e-24 115.5 456 29.6
CARHR254530 Cardamine hirsuta HOM05D002977 ORTHO05D003225 1.7e-22 111.3 449 27.2
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 3.7e-22 110.2 438 28.5
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 4.8e-22 109.8 375 31.2
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 4.1e-21 106.7 382 34.8
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 9.1e-21 105.5 437 26.5
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 1.6e-20 104.8 421 32.8
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.6e-20 104.8 454 30.0
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 2.7e-20 104.0 370 31.1
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 4.5e-20 103.2 453 28.7
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 7.7e-20 102.4 449 26.7
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 7.7e-20 102.4 390 32.1
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.9e-19 100.5 390 31.8
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 3.8e-19 100.1 420 31.2
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 8.5e-19 99.0 443 30.0
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.1e-18 98.6 389 31.1
Sp6g05680 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.5e-18 98.2 441 24.9
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.9e-18 97.8 435 31.3
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.5e-18 97.4 395 31.4
Thhalv10025169m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 7.2e-18 95.9 432 26.4
MD04G1068300 Malus domestica HOM05D002977 ORTHO05D003225 1.2e-17 95.1 240 33.3
BcaB01g01677 Brassica carinata HOM05D002977 ORTHO05D003225 1.6e-17 94.7 437 31.1
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 2.1e-17 94.4 405 30.1
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 2.7e-17 94.0 434 29.7
BraA09t38300Z Brassica rapa HOM05D002977 ORTHO05D003225 4.7e-17 93.2 447 25.3
Thhalv10028604m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 1.8e-16 91.3 459 27.2
BcaB05g23809 Brassica carinata HOM05D002977 ORTHO05D003225 2.3e-16 90.9 467 30.2
Oeu062354.1 Olea europaea HOM05D002977 ORTHO05D003225 3.0e-16 90.5 118 49.2
Carub.0006s3089 Capsella rubella HOM05D002977 ORTHO05D003225 6.8e-16 89.4 468 29.3
A02p26000 Brassica napus HOM05D002977 ORTHO05D003225 8.8e-16 89.0 474 27.6
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 8.8e-16 89.0 322 31.1
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 8.8e-16 89.0 403 32.8
AT4G11780 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 1.2e-15 88.6 448 29.2
A09p27340 Brassica napus HOM05D002977 ORTHO05D003225 2.0e-15 87.8 452 29.4
BcaC03g16329 Brassica carinata HOM05D002977 ORTHO05D003225 2.6e-15 87.4 466 29.6
C02p41490 Brassica napus HOM05D002977 ORTHO05D003225 2.6e-15 87.4 466 29.6
AL6G46490 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 3.4e-15 87.0 451 29.3
BraA02t07599Z Brassica rapa HOM05D002977 ORTHO05D003225 3.4e-15 87.0 477 27.7
A01p14320 Brassica napus HOM05D002977 ORTHO05D003225 5.7e-15 86.3 431 27.4
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 9.8e-15 85.5 411 27.3
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 9.8e-15 85.5 439 31.0
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.3e-14 85.1 450 28.7
AT4G23020 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 2.2e-14 84.3 433 26.3
Lalb_Chr16g0379981 Lupinus albus HOM05D002977 ORTHO05D003225 2.2e-14 84.3 408 25.7
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.8e-14 84.0 434 28.6
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 4.8e-14 83.2 450 26.4
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 8.3e-14 82.4 421 27.8
BcaB03g11755 Brassica carinata HOM05D002977 ORTHO05D003225 8.3e-14 82.4 262 32.8
BolC2t10166H Brassica oleracea HOM05D002977 ORTHO05D003225 1.1e-13 82.0 457 31.1
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.8e-13 81.3 179 33.0
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.0e-13 79.3 137 36.5
BcaC09g51034 Brassica carinata HOM05D002977 ORTHO05D003225 1.2e-12 78.6 436 26.1
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.2e-12 78.6 417 27.8
C01p17640 Brassica napus HOM05D002977 ORTHO05D003225 2.7e-12 77.4 436 26.4
Carub.0007s1825 Capsella rubella HOM05D002977 ORTHO05D003225 3.5e-12 77.0 429 24.5
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 7.7e-12 75.9 423 25.3
Sc01g0008790 Simmondsia chinensis HOM05D002977 ORTHO05D003225 2.3e-11 74.3 149 40.9
BolC9t56312H Brassica oleracea HOM05D002977 ORTHO05D003225 3.8e-11 73.6 457 29.5
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 6.6e-11 72.8 440 29.8
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 6.6e-11 72.8 439 26.9
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 8.6e-11 72.4 417 27.6
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 1.1e-10 72.0 288 31.6
C09p34660 Brassica napus HOM05D002977 ORTHO05D003225 1.9e-10 71.2 448 29.9
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 3.3e-10 70.5 434 27.4
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 3.3e-10 70.5 464 26.9
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.5e-10 69.7 434 26.5
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 7.2e-10 69.3 426 28.6
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 9.5e-10 68.9 442 27.4
BraA01t01377Z Brassica rapa HOM05D002977 ORTHO05D003225 2.1e-09 67.8 460 25.0
PSO782G0819 Papaver somniferum HOM05D002977 ORTHO05D003225 3.6e-09 67.0 153 34.0
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 4.7e-09 66.6 412 30.3
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 2.3e-08 64.3 408 27.7
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 2.3e-08 64.3 406 25.6
AL7G30500 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 3.0e-08 63.9 411 24.1
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 6.8e-08 62.8 88 40.9
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 6.8e-08 62.8 450 28.4
PSO478G2989 Papaver somniferum HOM05D002977 ORTHO05D003225 6.8e-08 62.8 151 32.5
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 8.9e-08 62.4 405 30.1
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 8.9e-08 62.4 305 30.2
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 1.2e-07 62.0 305 29.8
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 1.5e-07 61.6 168 32.1
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-07 61.6 441 27.7
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 3.4e-07 60.5 389 26.5
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.7e-07 59.7 332 32.8
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 1.3e-06 58.5 432 27.3
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.2e-06 57.8 440 24.1
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.8e-06 57.4 297 34.0
unitig_744.g24328 Utricularia gibba HOM05D002977 ORTHO05D003225 2.8e-06 57.4 51 52.9
Cpa.g.sc74.83 Carica papaya HOM05D002977 ORTHO05D003225 4.9e-06 56.6 103 33.0
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 4.9e-06 56.6 127 39.4
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 6.3e-06 56.2 424 26.2


User provided reference genes

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