Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002535 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 1.3e-221 772.7 374 100.0
CSS0020821 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 1.5e-100 370.5 373 55.5
CSS0038245 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 1.1e-84 317.8 311 55.3
CSS0037918 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 9.3e-79 298.1 316 54.1
CSS0049064 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 9.3e-79 298.1 348 52.9
CSS0012224 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.3e-72 277.7 445 41.3
CSS0038692 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-64 251.1 308 47.4
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-60 235.3 329 41.3
CSS0015688 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.6e-59 234.2 447 38.5
CSS0013810 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.3e-58 229.2 303 46.9
CSS0003904 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.9e-58 228.8 325 40.3
CSS0044588 Camellia sinensis var. sinensis HOM05D001357 ORTHO05D001224 2.5e-52 210.3 357 40.3
CSS0016021 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.3e-52 209.9 320 45.0
CSS0039848 Camellia sinensis var. sinensis HOM05D001357 ORTHO05D001224 9.7e-52 208.4 368 39.4
CSS0049565 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.2e-51 207.2 319 41.7
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.5e-20 102.4 128 42.2
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.3e-19 99.4 128 41.4
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.3e-19 99.0 263 31.2
CSS0045263 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 8.3e-19 99.0 110 41.8
CSS0013298 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.7e-16 91.3 110 35.5
CSS0014901 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.0e-16 89.7 105 38.1
CSS0029673 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.0e-16 89.7 110 36.4
CSS0005143 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 6.6e-16 89.4 110 36.4
CSS0028966 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 4.2e-15 86.7 95 38.9
CSS0039704 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.5e-15 86.3 110 33.6
CSS0036694 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.6e-14 84.7 106 35.8
CSS0031319 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.1e-14 84.3 109 33.9
Actinidia04386 Actinidia chinensis HOM05D000876 ORTHO05D000285 3.6e-14 83.6 128 33.6
Actinidia07377 Actinidia chinensis HOM05D000876 ORTHO05D000285 3.6e-14 83.6 128 33.6
Actinidia15148 Actinidia chinensis HOM05D000876 ORTHO05D000285 3.6e-14 83.6 128 33.6
CSS0041660 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 6.1e-14 82.8 119 31.9
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 8.0e-14 82.4 289 24.2
CSS0018277 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.8e-13 81.3 75 41.3
Medtr3g110155 Medicago truncatula HOM05D000876 ORTHO05D000285 2.3e-13 80.9 132 32.6
Medtr8g006585 Medicago truncatula HOM05D000876 ORTHO05D000285 2.3e-13 80.9 132 32.6
Medtr8g006695 Medicago truncatula HOM05D000876 ORTHO05D000285 2.3e-13 80.9 132 32.6
CSS0027195 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.5e-12 78.2 112 33.9
Medtr2g435870 Medicago truncatula HOM05D000876 ORTHO05D000285 1.5e-12 78.2 132 32.6
Actinidia36308 Actinidia chinensis HOM05D000876 ORTHO05D000285 2.0e-12 77.8 128 31.2
CSS0044094 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.6e-12 77.4 129 31.0
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.2e-11 74.3 339 23.3
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.2e-11 74.3 206 28.6
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.7e-11 73.6 128 35.2
Rhsim05G0157800 Rhododendron simsii HOM05D000876 ORTHO05D000285 8.3e-11 72.4 125 33.6
Rhsim10G0146900 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.1e-10 72.0 125 33.6
TPR.G25769 Trifolium pratense HOM05D000876 ORTHO05D000285 1.1e-10 72.0 83 38.6
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 1.4e-10 71.6 317 21.1
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 3.2e-10 70.5 127 33.1
Rhsim06G0024000 Rhododendron simsii HOM05D000876 ORTHO05D000285 3.2e-10 70.5 125 32.8
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 5.4e-10 69.7 223 25.6
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 5.4e-10 69.7 122 31.1
TPR.G33899 Trifolium pratense HOM05D000876 ORTHO05D000285 7.0e-10 69.3 127 31.5
Rhsim11G0045400 Rhododendron simsii HOM05D019962 ORTHO05D000285 1.2e-09 68.6 226 26.1
Medtr1g080080 Medicago truncatula HOM05D000876 ORTHO05D000285 2.0e-09 67.8 127 28.3
Medtr2g018710 Medicago truncatula HOM05D000876 ORTHO05D000285 2.0e-09 67.8 127 28.3
Medtr2g086350 Medicago truncatula HOM05D000876 ORTHO05D000285 2.0e-09 67.8 127 28.3
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-09 67.4 276 23.6
CSS0042709 Camellia sinensis var. sinensis HOM05D012179 ORTHO05D109585 2.7e-09 67.4 59 54.2
Gorai.010G124300 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.7e-09 67.4 110 33.6
TPR.G30704 Trifolium pratense HOM05D000876 ORTHO05D000285 3.5e-09 67.0 127 31.5
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 4.5e-09 66.6 127 29.9
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 5.9e-09 66.2 170 25.9
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 7.8e-09 65.9 138 27.5
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 7.8e-09 65.9 138 27.5
CiPaw.10G065300 Carya illinoinensis HOM05D000876 ORTHO05D000285 7.8e-09 65.9 129 30.2
Hma1.2p1_0228F.1_g096560 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 7.8e-09 65.9 125 31.2
FAN09G3146 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-08 65.5 131 28.2
FAN09G3305 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-08 65.5 131 28.2
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 1.0e-08 65.5 114 31.6
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 1.0e-08 65.5 114 31.6
Medtr1g016370 Medicago truncatula HOM05D000876 ORTHO05D000285 1.3e-08 65.1 114 31.6
arahy.Tifrunner.gnm1.ann1.4ILM2X Arachis hypogaea HOM05D000876 ORTHO05D000285 1.7e-08 64.7 87 35.6
Gorai.011G190800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.7e-08 64.7 110 31.8
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.7e-08 64.7 130 29.2
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.7e-08 64.7 282 22.0
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 2.3e-08 64.3 124 29.8
Glyma.01G052000 Glycine max HOM05D000876 ORTHO05D000285 2.3e-08 64.3 127 29.1
Hma1.2p1_2073F.1_g313200 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.9e-08 63.9 125 31.2
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 3.9e-08 63.5 130 29.2
CiPaw.08G085800 Carya illinoinensis HOM05D000876 ORTHO05D000285 5.0e-08 63.2 109 31.2
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.0e-08 63.2 127 31.5
Gorai.008G247700 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.0e-08 63.2 168 26.8
CiPaw.04G143900 Carya illinoinensis HOM05D000876 ORTHO05D000285 8.6e-08 62.4 125 28.8
Gorai.004G036600 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.6e-08 62.4 132 31.1
Gorai.011G083200 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.6e-08 62.4 112 32.1
Rhsim09G0041300 Rhododendron simsii HOM05D000876 ORTHO05D000285 8.6e-08 62.4 87 35.6
Atru.chr12.1553 Acer truncatum HOM05D000876 ORTHO05D000285 1.1e-07 62.0 82 34.1
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-07 62.0 82 34.1
CANSAT64G0872 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-07 62.0 82 34.1
Gohir.D08G116700 Gossypium hirsutum HOM05D000876 ORTHO05D000285 1.1e-07 62.0 127 30.7
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-07 61.6 138 26.8
Gorai.007G119700 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-07 61.6 132 29.5
Potri.010G190650 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-07 61.6 129 28.7
Potri.014G061450 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-07 61.6 129 28.7
CiPaw.15G017800 Carya illinoinensis HOM05D000876 ORTHO05D000285 1.9e-07 61.2 125 28.0
Glyma.04G129400 Glycine max HOM05D000876 ORTHO05D000285 1.9e-07 61.2 85 37.6
Glyma.15G226650 Glycine max HOM05D000876 ORTHO05D000285 1.9e-07 61.2 85 37.6
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 1.9e-07 61.2 85 37.6
Gorai.012G085300 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.9e-07 61.2 127 30.7
Rhsim01G0089100 Rhododendron simsii HOM05D000034 ORTHO05D000285 1.9e-07 61.2 136 30.1
Rhsim03G0048400 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.9e-07 61.2 136 30.1
TWI75G0795 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-07 61.2 122 29.5
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-07 60.8 278 23.0
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-07 60.8 131 26.7
Gorai.011G123600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.5e-07 60.8 132 30.3
Gorai.012G070700 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.5e-07 60.8 130 30.8
Rhsim10G0163900 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.5e-07 60.8 113 31.0
TWI56G0680 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.5e-07 60.8 123 30.9
FAN10G2856 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-07 60.5 131 26.7
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-07 60.5 131 26.7
Gorai.008G062400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 132 28.8
Gorai.011G122600 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 132 30.3
Gorai.N003000 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 132 29.5
Gorai.N004200 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 132 29.5
Rhsim04G0145400 Rhododendron simsii HOM05D000034 ORTHO05D000285 3.3e-07 60.5 113 31.0
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 122 28.7
TWI63G0199 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 78 38.5
TWI75G0526 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 122 29.5
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.3e-07 60.5 122 29.5
FAN11G2191 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.3e-07 60.1 131 26.7
Rhsim08G0093200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.3e-07 60.1 77 36.4
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 4.3e-07 60.1 122 27.9
TWI34G1697 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 5.6e-07 59.7 121 31.4
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-07 59.3 130 27.7
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-07 59.3 130 27.7
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 7.3e-07 59.3 130 27.7
Rhsim09G0200000 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.3e-07 59.3 113 31.0
RhsimUnG0152200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.3e-07 59.3 113 31.0
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 9.5e-07 58.9 113 29.2
Gorai.003G031500 Gossypium raimondii HOM05D000876 ORTHO05D000285 9.5e-07 58.9 86 37.2
Glyma.06G250600 Glycine max HOM05D000876 ORTHO05D000285 1.2e-06 58.5 85 36.5
Gorai.004G102900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.2e-06 58.5 132 28.8
PSO170G6809 Papaver somniferum HOM05D000876 ORTHO05D000285 1.2e-06 58.5 95 29.5
CiPaw.04G117800 Carya illinoinensis HOM05D000876 ORTHO05D000285 1.6e-06 58.2 129 27.1
Rhsim09G0055100 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.6e-06 58.2 74 37.8
Atru.chr10.1597 Acer truncatum HOM05D000876 ORTHO05D000285 2.1e-06 57.8 82 31.7
Potri.001G339400 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-06 57.8 123 26.0
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.8e-06 57.4 127 27.6
Hund30880 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.8e-06 57.4 243 22.6
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 3.6e-06 57.0 87 32.2
FAN20G0415 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-06 57.0 125 26.4
Hma1.2p1_1035F.1_g250490 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 3.6e-06 57.0 125 29.6
QL08p009302 Quercus lobata HOM05D000876 ORTHO05D000285 3.6e-06 57.0 131 26.7
Rhsim02G0037900 Rhododendron simsii HOM05D000034 ORTHO05D000285 3.6e-06 57.0 113 30.1
Rhsim06G0077800 Rhododendron simsii HOM05D000876 ORTHO05D000285 3.6e-06 57.0 85 34.1
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.6e-06 57.0 243 22.6
Gorai.006G093000 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.7e-06 56.6 127 30.7
Oeu044768.1 Olea europaea HOM05D000876 ORTHO05D000285 4.7e-06 56.6 81 34.6
Potri.007G118701 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.7e-06 56.6 119 25.2
vmacro09328 Vaccinium macrocarpon HOM05D000034 ORTHO05D000285 4.7e-06 56.6 70 42.9
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 4.7e-06 56.6 113 27.4
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 6.1e-06 56.2 87 32.2
Glyma.05G069200 Glycine max HOM05D000876 ORTHO05D000285 6.1e-06 56.2 82 36.6
Gorai.001G187700 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.1e-06 56.2 116 32.8
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 8.0e-06 55.8 69 39.1
Gorai.006G154000 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.0e-06 55.8 112 32.1
Gorai.007G258900 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.0e-06 55.8 86 34.9
Gorai.008G093400 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.0e-06 55.8 86 36.0
Potri.008G074066 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.0e-06 55.8 127 25.2


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