Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002526 Camellia sinensis var. sinensis HOM05D004434 ORTHO05D000365 1.1e-84 316.6 157 100.0
Actinidia19012 Actinidia chinensis HOM05D004434 ORTHO05D000365 5.7e-38 161.4 151 59.6
Duzib084G1427 Durio zibethinus HOM05D000627 ORTHO05D000365 4.8e-37 158.3 151 60.9
Thecc.03G096200 Theobroma cacao HOM05D000627 ORTHO05D000365 1.4e-36 156.8 152 61.8
GSVIVG01007914001 Vitis vinifera HOM05D000627 ORTHO05D000365 5.0e-34 148.3 148 57.4
Duzib205G1964 Durio zibethinus HOM05D000627 ORTHO05D000365 8.0e-32 141.0 150 56.7
TAR622G1366 Trochodendron aralioides HOM05D000627 ORTHO05D000365 1.4e-31 140.2 146 57.5
vmacro16517 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 1.4e-31 140.2 147 56.5
Ciclev10020323m.g Citrus clementina HOM05D000627 ORTHO05D000365 1.4e-28 130.2 156 54.5
Prupe.5G200100 Prunus persica HOM05D000627 ORTHO05D000365 2.4e-28 129.4 150 53.3
QL10p018585 Quercus lobata HOM05D000627 ORTHO05D000365 2.4e-28 129.4 156 54.5
CANSAT80G1684 Cannabis sativa HOM05D000627 ORTHO05D000365 9.1e-28 127.5 152 54.6
COL.COLO4_36880 Corchorus olitorius HOM05D000627 ORTHO05D000365 9.1e-28 127.5 165 51.5
Hma1.2p1_0060F.1_g033380 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 1.2e-27 127.1 146 52.7
CSS0002807 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 1.6e-27 126.7 153 56.2
Actinidia35022 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.0e-26 124.0 149 54.4
ClCG04G011970 Citrullus lanatus HOM05D000627 ORTHO05D000365 1.3e-26 123.6 158 46.8
MD14G1208000 Malus domestica HOM05D000627 ORTHO05D000365 3.2e-25 119.0 147 51.7
CsaV3_1G005810 Cucumis sativus L. HOM05D000627 ORTHO05D000365 7.2e-25 117.9 160 44.4
MD06G1199400 Malus domestica HOM05D000627 ORTHO05D000365 1.2e-24 117.1 148 51.4
Dinv10681 Davidia involucrata HOM05D000627 ORTHO05D000365 1.6e-24 116.7 159 51.6
Nitab4.5_0004511g0030 Nicotiana tabacum HOM05D000627 ORTHO05D000365 2.7e-24 115.9 156 48.7
MELO3C002012.2 Cucumis melo HOM05D000627 ORTHO05D000365 4.7e-24 115.2 160 44.4
Sed0002661 Sechium edule HOM05D000627 ORTHO05D000365 6.1e-24 114.8 157 45.2
Nitab4.5_0002881g0030 Nicotiana tabacum HOM05D000627 ORTHO05D000365 8.0e-24 114.4 154 48.7
CAN.G479.35 Capsicum annuum HOM05D000627 ORTHO05D000365 2.3e-23 112.8 150 50.7
Cc00_g02210 Coffea canephora HOM05D000627 ORTHO05D000365 2.3e-23 112.8 159 51.6
Gohir.A07G069700 Gossypium hirsutum HOM05D000627 ORTHO05D000365 5.2e-23 111.7 157 51.0
Manes.14G083200 Manihot esculenta HOM05D000627 ORTHO05D000365 5.2e-23 111.7 149 51.0
Haze_07673 Corylus avellana HOM05D000627 ORTHO05D000365 1.2e-22 110.5 159 49.7
Peaxi162Scf00201g00004 Petunia axillaris HOM05D000627 ORTHO05D000365 1.2e-22 110.5 149 49.0
Gorai.001G078500 Gossypium raimondii HOM05D000627 ORTHO05D000365 1.5e-22 110.2 157 51.0
Gohir.D07G074300 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.2e-21 106.3 157 50.3
PGSC0003DMG400024554 Solanum tuberosum HOM05D000627 ORTHO05D000365 8.3e-21 104.4 152 48.7
Solyc03g115540.2 Solanum lycopersicum HOM05D000627 ORTHO05D000365 1.1e-20 104.0 152 49.3
Sopen03g034530 Solanum pennellii HOM05D000627 ORTHO05D000365 1.1e-20 104.0 152 48.7
CiPaw.11G049200 Carya illinoinensis HOM05D000627 ORTHO05D000365 1.8e-20 103.2 158 50.0
EL10Ac5g11088 Beta vulgaris HOM05D000627 ORTHO05D000365 5.4e-20 101.7 188 42.6
Nn4g23345 Nelumbo nucifera HOM05D000627 ORTHO05D000365 7.0e-20 101.3 152 48.7
Lj5A106G72 Lonicera japonica HOM05D000627 ORTHO05D000365 7.7e-19 97.8 146 50.0
Gorai.003G099500 Gossypium raimondii HOM05D000627 ORTHO05D000365 2.3e-18 96.3 152 48.7
Gohir.A03G068700 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.9e-18 95.9 152 48.7
Gohir.D03G095300 Gossypium hirsutum HOM05D000627 ORTHO05D000365 8.6e-18 94.4 150 48.0
DCAR_016590 Daucus carota HOM05D004434 ORTHO05D000365 1.9e-17 93.2 158 40.5
FAN13G1454 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.9e-17 93.2 151 42.4
Dinv38775 Davidia involucrata HOM05D000630 ORTHO05D000365 3.3e-17 92.4 147 44.9
Sed0004756 Sechium edule HOM05D000627 ORTHO05D000365 3.3e-17 92.4 148 41.9
FvH4_5g14360 Fragaria vesca HOM05D000627 ORTHO05D000365 4.2e-17 92.0 151 42.4
FAN18G4303 Fragaria x ananassa HOM05D000627 ORTHO05D000365 4.2e-17 92.0 151 42.4
Lj9P468T54 Lonicera japonica HOM05D004434 ORTHO05D000365 5.5e-17 91.7 144 44.4
Cpa.g.sc1213.3 Carica papaya HOM05D000627 ORTHO05D000365 1.2e-16 90.5 148 44.6
Eucgr.K02496 Eucalyptus grandis HOM05D000627 ORTHO05D000365 1.2e-16 90.5 153 44.4
FAN08G1545 Fragaria x ananassa HOM05D002953 ORTHO05D000365 2.8e-16 89.4 151 41.7
Hund09845 Selenicereus undatus HOM05D000627 ORTHO05D000365 2.8e-16 89.4 166 42.2
MBI16_g15548_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 8.0e-16 87.8 145 41.4
DCAR_026020 Daucus carota HOM05D000627 ORTHO05D000365 2.6e-14 82.8 155 40.6
Cfa019292 Carpinus fangiana HOM05D000627 ORTHO05D000365 1.3e-13 80.5 158 42.4
RcHm_v2.0_Chr7g0182341 Rosa chinensis HOM05D000627 ORTHO05D000365 2.8e-13 79.3 151 39.1
Sc04g0003000 Simmondsia chinensis HOM05D000627 ORTHO05D000365 4.9e-13 78.6 151 39.1
Lj1g0019190 Lotus japonicus HOM05D000627 ORTHO05D000365 6.3e-13 78.2 159 39.0
Glyma.U031209 Glycine max HOM05D000627 ORTHO05D000365 8.3e-13 77.8 151 39.1
Oeu061162.1 Olea europaea HOM05D000627 ORTHO05D000365 1.1e-12 77.4 144 41.7
Peaxi162Scf00013g00537 Petunia axillaris HOM05D000627 ORTHO05D000365 4.1e-12 75.5 160 42.5
PSO478G3698 Papaver somniferum HOM05D000627 ORTHO05D000365 1.3e-10 70.5 153 37.9
MSTRG.4467 Avicennia marina HOM05D000627 ORTHO05D000365 5.0e-10 68.6 220 31.4
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 6.6e-10 68.2 170 39.4
arahy.Tifrunner.gnm1.ann1.ZPNH9W Arachis hypogaea HOM05D000627 ORTHO05D000365 1.1e-09 67.4 155 38.1
PSO017G6993 Papaver somniferum HOM05D000627 ORTHO05D000365 1.5e-09 67.0 157 35.7
Hund02614 Selenicereus undatus HOM05D000627 ORTHO05D000365 1.9e-09 66.6 179 40.2
Lsat_1_v5_gn_4_110001 Lactuca sativa HOM05D000627 ORTHO05D000365 9.5e-09 64.3 138 37.7
SalBow7G1337 Salvia bowleyana HOM05D000627 ORTHO05D000365 1.6e-08 63.5 162 37.0
arahy.Tifrunner.gnm1.ann1.PPQG6E Arachis hypogaea HOM05D000627 ORTHO05D000365 5.2e-07 58.5 163 32.5
Migut.D01669 Erythranthe guttata HOM05D000627 ORTHO05D000365 1.2e-06 57.4 59 61.0
HanXRQChr09g0270901 Helianthus annuus HOM05D000627 ORTHO05D000365 1.5e-06 57.0 135 34.8
PGR044G1490 Punica granatum HOM05D000627 ORTHO05D000365 1.5e-06 57.0 165 41.2


User provided reference genes

Program Settings