Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002499 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 3.8e-31 137.5 68 100.0
CSS0022526 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 2.7e-29 131.3 68 95.6
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-23 112.1 67 79.1
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-23 112.1 67 79.1
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-23 112.1 67 79.1
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-23 112.1 67 79.1
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.2e-22 106.7 67 76.1
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.2e-22 106.7 67 76.1
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 6.1e-21 103.6 67 74.6
CSS0021957 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 6.3e-18 93.6 68 67.6
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 3.5e-08 61.2 69 44.9
AUR62005892 Chenopodium quinoa HOM05D000004 ORTHO05D000378 5.9e-08 60.5 69 46.4
SHI14681 Sapria himalayana HOM05D000691 ORTHO05D000378 7.7e-08 60.1 62 48.4
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 6.6e-07 57.0 63 42.9
Lj4C260T12 Lonicera japonica HOM05D000691 ORTHO05D000378 8.6e-07 56.6 68 44.1
EL10Ac9g20847 Beta vulgaris HOM05D000691 ORTHO05D000378 1.1e-06 56.2 61 47.5
AUR62039030 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-06 56.2 55 52.7
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.5e-06 55.1 67 38.8
AUR62042282 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.3e-06 54.7 55 49.1
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 4.2e-06 54.3 67 38.8
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 4.2e-06 54.3 67 38.8
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 4.2e-06 54.3 67 38.8
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 4.2e-06 54.3 67 38.8


User provided reference genes

Program Settings