Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-109 397.9 193 100.0
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-109 397.9 193 100.0
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.4e-109 397.9 193 100.0
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.5e-104 382.9 193 97.4
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.6e-103 379.4 193 96.9
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.8e-102 375.9 193 96.4
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.3e-96 355.1 183 95.6
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 6.4e-92 340.9 193 88.6
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.4e-86 322.4 193 86.0
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 9.7e-72 273.9 183 72.7
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 3.1e-70 268.9 183 75.4
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 3.4e-69 265.4 181 74.6
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 4.8e-55 218.4 179 61.5
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 1.1e-54 217.2 185 61.1
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 4.1e-54 215.3 183 60.1
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 1.9e-51 206.5 184 60.9
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 1.9e-51 206.5 184 56.5
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 2.5e-51 206.1 192 54.7
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 1.0e-49 200.7 184 57.1
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 4.0e-49 198.7 200 53.5
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 1.3e-47 193.7 183 56.3
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 3.7e-47 192.2 184 55.4
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 3.7e-47 192.2 185 58.4
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 1.8e-46 189.9 184 53.3
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.6e-45 186.8 185 57.3
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 2.0e-45 186.4 183 55.7
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.0e-44 184.1 184 54.9
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.2e-44 183.0 184 53.8
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 2.2e-44 183.0 183 53.6
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 2.9e-44 182.6 184 51.6
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 5.0e-44 181.8 184 53.8
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 1.5e-43 180.3 184 52.2
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 1.5e-43 180.3 183 51.4
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 2.5e-43 179.5 184 54.9
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 3.2e-43 179.1 184 50.5
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 3.2e-43 179.1 184 50.5
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 7.2e-43 177.9 184 51.6
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 7.2e-43 177.9 184 51.6
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 9.4e-43 177.6 183 51.9
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 6.1e-42 174.9 184 51.1
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 6.1e-42 174.9 184 51.1
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 1.5e-40 170.2 184 52.7
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 1.5e-40 170.2 184 48.9
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 2.0e-40 169.9 188 51.1
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 2.0e-40 169.9 183 55.7
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 4.4e-40 168.7 182 51.1
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 7.5e-40 167.9 183 48.1
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 7.5e-40 167.9 184 50.5
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 9.8e-40 167.5 185 49.7
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 2.8e-39 166.0 189 48.1
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 4.9e-39 165.2 184 48.9
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 6.3e-39 164.9 184 49.5
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 8.3e-39 164.5 187 48.7
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 1.4e-38 163.7 181 49.2
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 1.4e-38 163.7 191 47.6
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 4.1e-38 162.2 184 48.4
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 5.4e-38 161.8 184 47.8
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 1.2e-37 160.6 188 48.4
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 3.5e-37 159.1 184 48.9
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 5.9e-37 158.3 185 48.6
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 2.3e-36 156.4 184 47.3
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 2.9e-36 156.0 184 46.7
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 9.5e-35 151.0 183 44.3
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 1.2e-34 150.6 184 45.1
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 1.6e-34 150.2 181 49.7
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 2.1e-34 149.8 185 45.9
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 2.1e-34 149.8 183 43.7
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 8.0e-34 147.9 184 47.3
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 1.4e-33 147.1 184 46.2
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.4e-33 147.1 191 44.0
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 2.3e-33 146.4 187 45.5
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 4.0e-33 145.6 184 44.6
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 1.5e-32 143.7 184 44.0
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 3.4e-32 142.5 185 43.8
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 1.3e-31 140.6 184 44.0
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 2.2e-31 139.8 184 43.5
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 2.8e-31 139.4 182 43.4
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 3.7e-31 139.0 185 43.2
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 1.1e-30 137.5 187 42.8
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 2.4e-30 136.3 184 42.9
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 4.1e-30 135.6 186 42.5
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 7.0e-30 134.8 185 45.4
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.6e-29 133.7 181 41.4
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.6e-29 133.7 181 41.4
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.7e-29 132.9 182 42.9
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 3.5e-29 132.5 183 40.4
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 4.6e-29 132.1 189 38.1
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 7.8e-29 131.3 181 41.4
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 7.8e-29 131.3 182 41.8
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 1.0e-28 131.0 189 40.7
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.3e-28 130.6 176 41.5
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 1.7e-28 130.2 182 38.5
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 2.3e-28 129.8 182 40.1
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 2.3e-28 129.8 182 38.5
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 2.9e-28 129.4 182 41.2
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 2.9e-28 129.4 184 42.4
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 5.0e-28 128.6 181 38.7
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.1e-27 127.5 182 41.2
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 1.5e-27 127.1 182 36.8
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 2.5e-27 126.3 182 41.2
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 3.3e-27 125.9 182 36.3
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 4.3e-27 125.6 182 35.7
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 4.3e-27 125.6 182 37.4
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 5.6e-27 125.2 182 37.4
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 5.6e-27 125.2 182 37.4
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 5.6e-27 125.2 182 37.4
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 5.6e-27 125.2 182 40.1
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 7.3e-27 124.8 182 40.1
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 7.3e-27 124.8 182 40.1
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 1.6e-26 123.6 182 39.0
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 2.8e-26 122.9 182 36.8
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 3.6e-26 122.5 182 38.5
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 3.6e-26 122.5 184 41.8
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 6.1e-26 121.7 182 39.0
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 1.0e-25 120.9 183 40.4
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 1.4e-25 120.6 183 38.8
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 4.4e-24 115.5 182 39.6
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 6.4e-23 111.7 184 39.7
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 4.1e-22 109.0 182 37.4
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 1.2e-21 107.5 183 37.2
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 1.6e-21 107.1 125 42.4
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 3.5e-21 105.9 182 37.4
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 6.0e-21 105.1 185 36.2
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 2.3e-20 103.2 82 57.3
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 8.6e-20 101.3 183 35.0
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 8.6e-20 101.3 175 36.0
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 1.1e-19 100.9 183 33.3
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 1.5e-19 100.5 140 44.3
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 1.9e-19 100.1 77 62.3
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 3.3e-19 99.4 151 39.7
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 7.3e-19 98.2 141 43.3
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 9.5e-19 97.8 120 50.8
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 2.1e-18 96.7 61 77.0
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 1.8e-17 93.6 77 53.2
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 5.8e-16 88.6 154 37.7
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 1.1e-14 84.3 247 28.3
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 4.1e-14 82.4 185 31.4
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 4.6e-13 79.0 178 32.0
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 4.7e-10 68.9 60 46.7
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 1.8e-09 67.0 121 37.2
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 7.1e-06 55.1 109 27.5


User provided reference genes

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