Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002479 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.9e-36 155.2 73 100.0
CSS0012661 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 2.7e-35 151.4 73 97.3
CSS0008158 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 8.3e-32 139.8 65 98.5
CSS0009145 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 8.3e-32 139.8 65 98.5
CSS0029893 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.4e-31 139.0 73 91.8
CSS0026552 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111796 1.6e-19 99.0 87 59.8
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 4.4e-17 90.9 72 66.7
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 4.4e-17 90.9 70 65.7
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 5.7e-17 90.5 72 63.9
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 5.7e-17 90.5 72 63.9
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 7.5e-17 90.1 47 87.2
Dinv06874 Davidia involucrata HOM05D000251 ORTHO05D005532 9.8e-17 89.7 70 64.3
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 85.1
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 85.1
Dinv04805 Davidia involucrata HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 85.1
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 85.1
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 1.7e-16 89.0 72 63.9
Psat6g048960 Pisum sativum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 49 81.6
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 2.2e-16 88.6 47 85.1
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 2.2e-16 88.6 70 65.7
Peaxi162Scf00495g00121 Petunia axillaris HOM05D000251 ORTHO05D005532 2.2e-16 88.6 47 83.0
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 2.2e-16 88.6 72 62.5
CSS0032362 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111740 2.8e-16 88.2 73 64.4
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 2.8e-16 88.2 70 65.7
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 2.8e-16 88.2 70 65.7
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 2.8e-16 88.2 70 64.3
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 3.7e-16 87.8 47 83.0
CSS0021916 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 3.7e-16 87.8 65 67.7
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 3.7e-16 87.8 49 81.6
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 4.9e-16 87.4 70 64.3
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 4.9e-16 87.4 49 81.6
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 4.9e-16 87.4 49 81.6
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 4.9e-16 87.4 49 81.6
Solyc11g017170.1 Solanum lycopersicum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 4.9e-16 87.4 47 83.0
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 6.3e-16 87.0 47 83.0
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 81.6
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 6.3e-16 87.0 47 85.1
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 6.3e-16 87.0 52 76.9
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 6.3e-16 87.0 52 76.9
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 81.6
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 81.6
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 6.3e-16 87.0 47 83.0
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 81.6
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 6.3e-16 87.0 46 89.1
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 8.3e-16 86.7 47 83.0
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 8.3e-16 86.7 49 79.6
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 8.3e-16 86.7 49 79.6
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 8.3e-16 86.7 49 79.6
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 1.1e-15 86.3 49 81.6
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.4e-15 85.9 46 87.0
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 1.4e-15 85.9 47 80.9
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 1.8e-15 85.5 47 80.9
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 1.8e-15 85.5 49 79.6
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 1.8e-15 85.5 49 77.6
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 79.6
CiPaw.03G180300 Carya illinoinensis HOM05D000251 ORTHO05D005532 2.4e-15 85.1 51 76.5
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 80.9
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 80.9
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 80.9
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 80.9
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 75.5
Prupe.3G133300 Prunus persica HOM05D000251 ORTHO05D005532 3.2e-15 84.7 49 79.6
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 3.2e-15 84.7 47 78.7
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 4.1e-15 84.3 49 79.6
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 4.1e-15 84.3 47 80.9
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 4.1e-15 84.3 47 80.9
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 4.1e-15 84.3 47 80.9
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 5.4e-15 84.0 46 82.6
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 5.4e-15 84.0 47 80.9
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 7.0e-15 83.6 49 79.6
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 7.0e-15 83.6 49 79.6
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 7.0e-15 83.6 49 79.6
Lalb_Chr24g0399971 Lupinus albus HOM05D000251 ORTHO05D005532 7.0e-15 83.6 49 77.6
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 7.0e-15 83.6 47 78.7
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 7.0e-15 83.6 49 79.6
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 7.0e-15 83.6 47 78.7
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 9.2e-15 83.2 49 77.6
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 9.2e-15 83.2 49 77.6
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 1.6e-14 82.4 47 78.7
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 1.6e-14 82.4 49 77.6
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 2.0e-14 82.0 47 76.6
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 2.7e-14 81.6 49 77.6
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 2.7e-14 81.6 49 77.6
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 3.5e-14 81.3 47 78.7
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 3.5e-14 81.3 47 78.7
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 3.5e-14 81.3 49 77.6
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 4.6e-14 80.9 47 72.3
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 4.6e-14 80.9 47 78.7
HPP92_008210 Vanilla planifolia HOM05D000251 ORTHO05D005532 2.5e-12 75.1 47 70.2
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 9.5e-12 73.2 47 63.8
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 1.2e-11 72.8 47 66.0
SHI10378 Sapria himalayana HOM05D000251 ORTHO05D000014 1.6e-11 72.4 48 70.8
SMO116G0312 Selaginella moellendorffii HOM05D000251 ORTHO05D005532 1.6e-11 72.4 52 63.5
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 2.8e-11 71.6 46 67.4
CBR_g6606 Chara braunii HOM05D000251 ORTHO05D005532 6.1e-11 70.5 47 63.8
CDE11G0168 Ceratophyllum demersum HOM05D000251 ORTHO05D005532 1.0e-10 69.7 47 61.7
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 4.0e-10 67.8 49 57.1
SEGI_32001 Sequoiadendron giganteum HOM05D000251 ORTHO05D005532 8.9e-10 66.6 47 61.7
Pp3c6_12690 Physcomitrium patens HOM05D000251 ORTHO05D005532 2.0e-09 65.5 47 57.4
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 7.5e-09 63.5 47 61.7


User provided reference genes

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