Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.0e-54 214.9 109 100.0
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.4e-30 136.3 156 55.8
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.8e-30 136.0 157 55.4
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.7e-25 119.4 153 51.6
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.7e-25 119.4 111 65.8
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 6.3e-20 100.9 154 44.2
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.4e-19 99.0 159 44.7
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 3.5e-18 95.1 166 41.0
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 1.7e-17 92.8 168 41.1
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 3.8e-17 91.7 111 52.3
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 8.6e-17 90.5 133 49.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.1e-16 90.1 133 49.6
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 4.3e-16 88.2 112 50.0
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 4.3e-16 88.2 133 48.9
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 9.5e-16 87.0 103 53.4
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 9.5e-16 87.0 162 40.7
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.2e-15 86.7 108 50.9
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.6e-15 86.3 163 40.5
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.6e-15 86.3 154 40.3
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.1e-15 85.9 108 50.0
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 2.8e-15 85.5 110 48.2
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 3.6e-15 85.1 104 47.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 3.6e-15 85.1 133 45.9
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 6.1e-15 84.3 104 50.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 6.1e-15 84.3 103 49.5
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 8.0e-15 84.0 124 45.2
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.0e-14 83.6 108 50.0
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.0e-14 83.6 102 52.0
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 1.4e-14 83.2 110 48.2
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 1.4e-14 83.2 110 48.2
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 2.3e-14 82.4 104 49.0
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.3e-14 82.4 103 50.5
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 3.0e-14 82.0 108 51.9
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 3.0e-14 82.0 103 50.5
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 3.0e-14 82.0 103 48.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 3.0e-14 82.0 103 48.5
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 4.0e-14 81.6 56 76.8
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 6.8e-14 80.9 103 50.5
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 6.8e-14 80.9 108 49.1
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 1.2e-13 80.1 107 51.4
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 1.2e-13 80.1 108 49.1
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.5e-13 79.7 108 48.1
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.5e-13 79.7 105 51.4
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 2.0e-13 79.3 107 51.4
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.0e-13 79.3 106 49.1
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 2.6e-13 79.0 104 51.9
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.6e-13 79.0 127 43.3
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 2.6e-13 79.0 104 47.1
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 2.6e-13 79.0 104 48.1
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 2.6e-13 79.0 105 47.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 3.4e-13 78.6 56 73.2
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.4e-13 78.6 104 46.2
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.4e-13 78.6 104 46.2
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 3.4e-13 78.6 108 45.4
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 4.4e-13 78.2 128 40.6
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 4.4e-13 78.2 89 51.7
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 5.8e-13 77.8 103 47.6
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 7.5e-13 77.4 130 43.1
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 9.8e-13 77.0 108 48.1
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 1.3e-12 76.6 62 67.7
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.3e-12 76.6 130 43.1
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.3e-12 76.6 108 46.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 1.7e-12 76.3 110 44.5
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.7e-12 76.3 150 38.0
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.7e-12 76.3 104 50.0
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.7e-12 76.3 111 48.6
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.7e-12 76.3 107 49.5
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.7e-12 76.3 134 43.3
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.2e-12 75.9 105 43.8
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 2.2e-12 75.9 104 50.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.9e-12 75.5 129 42.6
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.9e-12 75.5 104 46.2
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 3.7e-12 75.1 62 66.1
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 4.9e-12 74.7 107 48.6
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 6.4e-12 74.3 108 45.4
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 6.4e-12 74.3 55 69.1
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 6.4e-12 74.3 107 45.8
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 8.3e-12 73.9 105 48.6
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 8.3e-12 73.9 128 42.2
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 8.3e-12 73.9 128 42.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.1e-11 73.6 137 40.9
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.1e-11 73.6 137 40.9
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.4e-11 73.2 55 67.3
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 2.4e-11 72.4 104 48.1
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 2.4e-11 72.4 104 48.1
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 2.4e-11 72.4 104 48.1
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 3.2e-11 72.0 62 67.7
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 3.2e-11 72.0 62 67.7
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 3.2e-11 72.0 107 46.7
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 4.1e-11 71.6 128 39.8
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 5.4e-11 71.2 106 45.3
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 7.0e-11 70.9 105 46.7
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.2e-10 70.1 106 46.2
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 2.0e-10 69.3 57 63.2
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.0e-10 69.3 55 72.7
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 2.0e-10 69.3 106 44.3
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 2.7e-10 68.9 102 45.1
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 3.0e-09 65.5 56 64.3
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.0e-09 65.5 56 67.9
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 6.6e-09 64.3 55 67.3
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 4.3e-08 61.6 58 60.3
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 5.6e-08 61.2 146 37.0
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.6e-07 59.7 55 65.5
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 3.6e-07 58.5 57 59.6
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 4.7e-07 58.2 56 58.9
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.7e-07 58.2 55 60.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 8.0e-07 57.4 59 57.6
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.1e-06 57.0 57 59.6
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 6.8e-06 54.3 54 61.1
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 6.8e-06 54.3 90 43.3


User provided reference genes

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