Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.3e-75 285.4 141 100.0
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 9.3e-48 193.7 108 86.1
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 6.7e-46 187.6 99 90.9
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.1e-45 186.8 108 82.4
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.1e-45 186.8 105 82.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 7.4e-45 184.1 104 83.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 3.7e-44 181.8 103 84.5
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 3.7e-44 181.8 108 81.5
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 8.1e-44 180.6 103 84.5
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 8.1e-44 180.6 105 79.0
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 2.4e-43 179.1 103 84.5
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 9.0e-43 177.2 102 81.4
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 9.0e-43 177.2 103 80.6
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 1.2e-42 176.8 106 80.2
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.2e-42 176.8 104 81.7
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.0e-42 176.0 97 84.5
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.0e-42 176.0 105 77.1
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.0e-42 176.0 105 79.0
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.6e-42 175.6 105 77.1
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 7.6e-42 174.1 108 77.8
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 7.6e-42 174.1 91 89.0
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.7e-41 172.9 102 82.4
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.7e-41 172.9 102 82.4
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.2e-41 172.6 105 76.2
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.9e-41 172.2 90 88.9
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 4.9e-41 171.4 102 80.4
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 6.5e-41 171.0 102 81.4
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 6.5e-41 171.0 104 78.8
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.1e-40 170.2 95 83.2
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 1.1e-40 170.2 103 76.7
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.4e-40 169.9 89 87.6
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.4e-40 169.9 108 76.9
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.5e-40 169.1 108 75.9
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 3.2e-40 168.7 91 87.9
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 3.2e-40 168.7 91 87.9
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 7.1e-40 167.5 91 85.7
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 9.3e-40 167.2 96 81.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 9.3e-40 167.2 91 85.7
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 1.2e-39 166.8 109 71.6
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 2.1e-39 166.0 91 85.7
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.1e-39 166.0 91 85.7
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.1e-39 166.0 101 78.2
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.5e-39 165.2 88 85.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.0e-38 163.7 91 84.6
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.8e-38 162.9 94 80.9
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 2.3e-38 162.5 92 82.6
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 2.3e-38 162.5 88 84.1
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 3.0e-38 162.2 102 73.5
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 3.0e-38 162.2 92 82.6
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 6.7e-38 161.0 92 82.6
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 6.7e-38 161.0 90 84.4
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 8.7e-38 160.6 93 83.9
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 8.7e-38 160.6 105 70.5
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.1e-37 160.2 88 85.2
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.5e-37 159.8 97 77.3
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.5e-37 159.8 92 80.4
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.9e-37 159.5 91 81.3
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.7e-37 157.9 108 73.1
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.7e-37 157.9 108 73.1
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 9.6e-37 157.1 91 81.3
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.3e-36 156.8 91 81.3
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.3e-36 156.8 91 80.2
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.6e-36 156.4 91 80.2
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.6e-36 156.4 90 78.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 2.1e-36 156.0 91 81.3
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 2.1e-36 156.0 97 74.2
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 2.8e-36 155.6 91 81.3
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.8e-36 155.6 91 81.3
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 6.3e-36 154.5 106 69.8
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 5.3e-35 151.4 103 68.0
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 5.3e-35 151.4 103 68.0
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 5.3e-35 151.4 103 68.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.2e-34 150.2 103 67.0
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.5e-34 149.8 97 69.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.5e-34 149.8 92 77.2
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.6e-34 149.1 82 85.4
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 4.5e-34 148.3 103 66.0
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 4.5e-34 148.3 103 67.0
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 4.5e-34 148.3 90 74.4
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 4.5e-34 148.3 89 75.3
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 4.5e-34 148.3 94 75.5
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 5.9e-34 147.9 103 66.0
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 7.6e-34 147.5 103 68.0
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.0e-33 147.1 103 66.0
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 5.0e-33 144.8 89 73.0
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 5.0e-33 144.8 89 73.0
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 5.0e-33 144.8 89 73.0
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 6.5e-33 144.4 92 75.0
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 1.9e-32 142.9 89 71.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 2.5e-32 142.5 88 70.5
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 7.2e-32 141.0 102 63.7
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.2e-31 140.2 164 47.6
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 1.6e-31 139.8 90 72.2
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 2.1e-31 139.4 108 66.7
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.3e-30 136.7 87 69.0
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.5e-29 132.5 76 84.2
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.2e-28 129.4 95 63.2
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 4.1e-27 125.2 89 68.5
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 1.8e-22 109.8 62 82.3
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.0e-22 109.0 61 82.0
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.4e-19 99.4 60 73.3
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 4.5e-18 95.1 86 47.7
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 2.1e-15 86.3 86 40.7
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.1e-15 84.7 120 33.3
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.2e-07 60.5 49 59.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.6e-07 58.9 29 86.2
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 3.6e-07 58.9 29 86.2
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 6.1e-07 58.2 36 69.4
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.0e-06 57.4 30 80.0


User provided reference genes

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