Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002456 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.3e-80 301.2 145 100.0
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 8.1e-39 164.1 160 56.9
Lj6C18T11 Lonicera japonica HOM05D003336 ORTHO05D003807 9.0e-38 160.6 191 51.3
CSS0038429 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.0e-37 159.5 186 53.2
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 2.6e-37 159.1 186 52.2
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.5e-37 158.3 186 52.7
CSS0035259 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.8e-37 157.9 188 52.7
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 5.8e-37 157.9 186 52.2
vmacro00616 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 5.8e-37 157.9 199 49.2
vmacro00649 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 5.8e-37 157.9 199 49.2
Cfa013247 Carpinus fangiana HOM05D003336 ORTHO05D003807 7.6e-37 157.5 188 51.1
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 7.6e-37 157.5 205 48.8
Haze_21691 Corylus avellana HOM05D003336 ORTHO05D003807 9.9e-37 157.1 188 51.6
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 1.3e-36 156.8 186 51.6
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 1.3e-36 156.8 186 51.6
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.7e-36 156.4 186 51.1
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.7e-36 156.4 186 51.1
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.2e-36 156.0 186 51.1
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 2.2e-36 156.0 186 51.1
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 2.2e-36 156.0 186 51.1
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 2.9e-36 155.6 205 48.3
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 2.9e-36 155.6 186 51.1
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 2.9e-36 155.6 186 51.1
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 2.9e-36 155.6 186 51.6
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 2.9e-36 155.6 186 51.1
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 3.8e-36 155.2 186 51.1
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 3.8e-36 155.2 186 51.1
Actinidia35985 Actinidia chinensis HOM05D003336 ORTHO05D003807 6.4e-36 154.5 185 51.4
Actinidia35987 Actinidia chinensis HOM05D003336 ORTHO05D003807 6.4e-36 154.5 185 51.4
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 6.4e-36 154.5 186 51.1
Ca_10458_v3 Cicer arietinum L. HOM05D003336 ORTHO05D003807 8.4e-36 154.1 193 48.7
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 8.4e-36 154.1 185 50.8
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 8.4e-36 154.1 186 50.5
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.1e-35 153.7 186 50.5
Dinv22743 Davidia involucrata HOM05D003336 ORTHO05D003807 1.1e-35 153.7 189 50.3
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.1e-35 153.7 186 50.5
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 1.1e-35 153.7 186 50.0
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 1.1e-35 153.7 186 51.1
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 1.4e-35 153.3 186 49.5
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 1.9e-35 152.9 185 50.3
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.9e-35 152.9 185 49.7
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 1.9e-35 152.9 185 49.7
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 1.9e-35 152.9 186 51.1
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.9e-35 152.9 186 50.5
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 2.4e-35 152.5 185 49.2
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 3.2e-35 152.1 186 50.5
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 3.2e-35 152.1 185 50.3
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 3.2e-35 152.1 186 48.9
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 4.2e-35 151.8 185 50.3
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 4.2e-35 151.8 186 50.0
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 5.4e-35 151.4 186 50.0
Peaxi162Scf00108g01317 Petunia axillaris HOM05D003336 ORTHO05D003807 5.4e-35 151.4 185 49.7
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 5.4e-35 151.4 186 51.1
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 5.4e-35 151.4 186 50.5
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 7.1e-35 151.0 186 49.5
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 9.3e-35 150.6 185 49.7
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 9.3e-35 150.6 185 50.3
MBI01_g10303_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 9.3e-35 150.6 182 51.6
GSVIVG01010779001 Vitis vinifera HOM05D003336 ORTHO05D003807 9.3e-35 150.6 186 50.0
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 1.6e-34 149.8 185 49.2
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 1.6e-34 149.8 185 49.2
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 2.1e-34 149.4 186 48.9
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 2.1e-34 149.4 186 48.9
Nitab4.5_0000233g0220 Nicotiana tabacum HOM05D003336 ORTHO05D003807 2.1e-34 149.4 184 49.5
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 2.1e-34 149.4 183 50.3
Aqoxy1G02652 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 2.7e-34 149.1 183 50.3
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 2.7e-34 149.1 185 49.7
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.7e-34 149.1 178 52.8
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.7e-34 149.1 179 51.4
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.7e-34 149.1 179 51.4
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 3.5e-34 148.7 186 48.4
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.5e-34 148.7 185 49.7
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.5e-34 148.7 185 49.7
SalBow1G0055 Salvia bowleyana HOM05D003336 ORTHO05D003807 3.5e-34 148.7 186 48.9
SalBow1G1314 Salvia bowleyana HOM05D003336 ORTHO05D003807 3.5e-34 148.7 186 48.9
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 4.6e-34 148.3 183 49.7
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 4.6e-34 148.3 184 50.0
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 6.0e-34 147.9 185 49.2
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 6.0e-34 147.9 186 50.0
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 6.0e-34 147.9 186 50.0
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.0e-34 147.9 186 50.0
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 7.9e-34 147.5 185 49.7
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 7.9e-34 147.5 185 49.2
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.0e-33 147.1 185 49.2
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 1.0e-33 147.1 186 47.8
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.0e-33 147.1 185 49.2
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.0e-33 147.1 186 48.9
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-33 146.4 186 49.5
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 2.3e-33 146.0 185 48.6
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 2.3e-33 146.0 185 48.6
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 3.0e-33 145.6 183 49.2
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.0e-33 145.6 186 49.5
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.9e-33 145.2 173 52.6
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.9e-33 145.2 184 50.0
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 3.9e-33 145.2 185 48.1
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 3.9e-33 145.2 185 48.1
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 5.1e-33 144.8 186 47.3
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 5.1e-33 144.8 186 47.3
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 5.1e-33 144.8 186 47.3
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 6.7e-33 144.4 186 47.3
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 6.7e-33 144.4 186 47.3
Cc04_g08960 Coffea canephora HOM05D003336 ORTHO05D003807 2.5e-32 142.5 185 48.1
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 5.6e-32 141.4 185 47.0
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 9.6e-32 140.6 183 48.1
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.3e-31 140.2 183 47.0
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.6e-31 139.8 185 48.6
Lalb_Chr09g0333021 Lupinus albus HOM05D003336 ORTHO05D003807 1.6e-31 139.8 156 53.8
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 2.1e-31 139.4 183 47.5
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 2.1e-31 139.4 183 47.0
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 1.2e-29 133.7 182 46.2
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.0e-29 132.9 178 47.8
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.8e-29 131.3 130 60.8
MELO3C000960.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.3e-28 130.2 165 49.7
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 1.7e-28 129.8 182 45.1
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 2.2e-28 129.4 183 43.7
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 4.9e-28 128.3 182 44.0
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 3.2e-27 125.6 183 43.2
BcaB07g33710 Brassica carinata HOM05D003336 ORTHO05D003807 4.2e-27 125.2 172 44.2
Nitab4.5_0005460g0060 Nicotiana tabacum HOM05D003336 ORTHO05D003807 4.2e-27 125.2 165 47.3
Sed0015341 Sechium edule HOM05D003336 ORTHO05D003807 4.2e-27 125.2 179 44.1
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 4.6e-26 121.7 180 43.3
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.3e-25 119.4 176 46.0
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 9.6e-24 114.0 159 49.1
Haze_26283 Corylus avellana HOM05D003336 ORTHO05D003807 9.6e-24 114.0 183 36.1
Prupe.1G196100 Prunus persica HOM05D003336 ORTHO05D003807 4.8e-23 111.7 146 47.3
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 1.1e-22 110.5 110 57.3
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.1e-22 110.5 81 70.4
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 1.4e-22 110.2 110 56.4
CDE02G0747 Ceratophyllum demersum HOM05D003336 ORTHO05D003807 1.4e-22 110.2 158 44.9
MELO3C028715.2 Cucumis melo HOM05D003336 ORTHO05D003807 4.0e-22 108.6 135 50.4
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 5.8e-21 104.8 82 64.6
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 2.2e-20 102.8 135 48.1
Sp7g20730 Schrenkiella parvula HOM05D003336 ORTHO05D003807 6.5e-20 101.3 135 45.2
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.4e-20 100.9 135 47.4
Sabra07G0105400 Salix brachista HOM05D003336 ORTHO05D000611 2.7e-18 95.9 134 48.5
Potri.007G129400 Populus trichocarpa HOM05D003336 ORTHO05D003807 4.6e-18 95.1 131 45.0
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 2.3e-17 92.8 200 32.0
CSS0009752 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-16 90.1 69 66.7
CSS0005877 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.4e-16 87.8 70 65.7
Lj6C12T9 Lonicera japonica HOM05D003336 ORTHO05D003807 1.6e-15 86.7 124 45.2
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 2.8e-15 85.9 68 66.2
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 6.3e-15 84.7 68 63.2
CSS0004282 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.3e-15 84.7 86 58.1
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 6.3e-15 84.7 124 45.2
Lalb_Chr05g0230051 Lupinus albus HOM05D003336 ORTHO05D003807 1.8e-14 83.2 67 65.7
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 5.3e-14 81.6 68 66.2
SEGI_10539 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 9.0e-14 80.9 83 50.6
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.6e-13 79.3 83 53.0
CSS0042287 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.5e-11 71.6 58 62.1
Atru.chr6.1069 Acer truncatum HOM05D003336 ORTHO05D003807 3.0e-09 65.9 46 71.7
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.1e-08 63.9 47 61.7
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 2.0e-08 63.2 31 90.3
RcHm_v2.0_Chr1g0329841 Rosa chinensis HOM05D003336 ORTHO05D003807 3.3e-08 62.4 31 87.1
CARHR113970 Cardamine hirsuta HOM05D003336 ORTHO05D003807 7.4e-08 61.2 56 58.9
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 2.2e-07 59.7 57 56.1
AagrBONN_evm.TU.Sc2ySwM_117.2573 Anthoceros agrestis HOM05D001778 ORTHO05D005872 2.8e-07 59.3 42 57.1
BraA08t33567Z Brassica rapa HOM05D003336 ORTHO05D003807 6.3e-07 58.2 44 56.8
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.1e-06 57.4 39 69.2
Lj6C18T3 Lonicera japonica HOM05D003336 ORTHO05D003807 2.4e-06 56.2 50 58.0


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