Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.0e-127 459.1 235 100.0
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.1e-125 451.4 235 98.3
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 7.3e-114 414.1 235 87.7
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.7e-107 392.9 236 84.3
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.7e-107 392.9 235 82.1
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 8.9e-104 380.6 224 85.7
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 4.4e-103 378.3 235 78.3
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 4.9e-102 374.8 236 78.8
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.3e-99 366.7 253 73.9
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 6.6e-99 364.4 234 75.6
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.9e-98 362.8 236 76.3
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 5.6e-98 361.3 229 76.9
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 9.6e-98 360.5 236 76.3
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 2.8e-97 359.0 225 78.7
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.1e-96 357.1 236 75.4
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 6.9e-96 354.4 234 73.5
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.0e-95 352.8 212 80.7
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.0e-95 352.8 234 71.8
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.0e-95 352.8 239 72.8
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 3.4e-95 352.1 237 73.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 5.8e-95 351.3 235 72.8
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 5.8e-95 351.3 236 74.6
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.3e-94 350.1 236 73.3
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.7e-94 349.7 234 73.1
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 4.9e-94 348.2 235 72.8
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.9e-93 346.3 233 70.4
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 2.4e-93 345.9 236 71.6
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.2e-93 345.1 235 70.6
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 5.4e-93 344.7 233 73.8
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.7e-92 342.4 233 73.4
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 2.7e-92 342.4 230 73.5
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 4.6e-92 341.7 234 70.9
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 4.6e-92 341.7 234 70.9
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 7.9e-92 340.9 235 71.5
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.7e-91 339.7 233 70.8
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 3.0e-91 339.0 229 75.1
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 3.0e-91 339.0 235 71.5
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.9e-91 338.6 230 70.9
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 6.6e-91 337.8 223 74.9
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 6.6e-91 337.8 234 70.1
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 8.7e-91 337.4 223 73.1
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-90 337.0 234 70.1
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.9e-90 336.3 236 72.5
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 4.3e-90 335.1 230 70.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 5.6e-90 334.7 240 68.8
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 7.4e-90 334.3 233 71.2
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 7.4e-90 334.3 237 71.3
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 9.6e-90 334.0 225 72.4
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.3e-89 333.6 234 69.7
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-89 333.6 234 69.7
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.3e-89 333.6 236 72.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 1.6e-89 333.2 213 76.5
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 6.2e-89 331.3 219 75.8
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.1e-88 330.5 230 71.3
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 3.1e-88 328.9 236 69.9
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 4.0e-88 328.6 234 69.2
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 5.3e-88 328.2 212 77.8
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.0e-87 326.2 232 68.5
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 3.8e-86 322.0 232 68.1
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 6.4e-86 321.2 226 68.6
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.1e-85 320.5 231 68.8
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.2e-85 318.5 224 69.6
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 9.3e-85 317.4 228 68.0
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.6e-84 316.6 237 66.2
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 2.1e-84 316.2 230 66.5
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 1.0e-83 313.9 235 65.1
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 5.1e-83 311.6 231 65.8
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.1e-82 310.5 240 64.6
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 5.6e-82 308.1 236 63.6
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 7.4e-82 307.8 239 64.4
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.6e-81 306.6 237 66.2
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 6.2e-81 304.7 237 64.1
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.4e-80 302.8 237 62.4
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 6.9e-80 301.2 237 62.0
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 2.6e-79 299.3 224 65.6
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 5.8e-79 298.1 238 61.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 5.8e-79 298.1 237 62.0
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 5.8e-79 298.1 221 68.3
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.3e-78 297.0 237 61.2
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.9e-78 295.8 237 61.6
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.9e-78 295.8 237 61.6
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 3.8e-78 295.4 237 61.2
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 1.1e-77 293.9 238 60.1
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 4.2e-77 292.0 221 64.3
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 5.5e-77 291.6 236 60.6
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 9.3e-77 290.8 229 65.5
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.2e-76 290.4 236 64.0
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 2.7e-76 289.3 214 67.3
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 4.6e-76 288.5 228 62.3
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.5e-74 283.5 207 67.1
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.9e-74 283.1 226 65.0
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 7.4e-74 281.2 221 64.7
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 8.4e-70 267.7 223 61.9
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 5.5e-69 265.0 262 53.1
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 1.3e-65 253.8 151 84.8
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 9.0e-64 247.7 158 77.2
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.4e-61 240.4 231 58.0
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.1e-56 224.2 229 52.4
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.8e-48 196.8 148 62.2
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 4.1e-48 195.7 139 66.2
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.2e-47 194.1 236 48.7
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.5e-45 186.4 158 61.4
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.0e-43 181.0 224 42.4
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 4.0e-43 179.1 225 42.2
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.0e-43 179.1 209 41.6
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.1e-37 161.0 217 36.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 4.2e-37 159.1 218 37.6
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.4e-35 154.1 216 36.6
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 4.0e-35 152.5 164 50.6
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 6.8e-35 151.8 117 62.4
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.0e-30 137.9 101 68.3
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 3.2e-29 132.9 108 63.9
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 5.0e-22 109.0 72 68.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.0e-19 101.3 208 31.7
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 6.2e-12 75.5 68 55.9
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 6.2e-12 75.5 68 55.9
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 1.5e-10 70.9 43 74.4
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 1.9e-08 63.9 43 62.8


User provided reference genes

Program Settings