Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002414 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 3.8e-111 404.8 204 100.0
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.0e-47 194.1 174 67.8
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.0e-47 194.1 174 67.8
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.3e-47 193.0 174 67.2
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 8.7e-47 191.0 174 66.7
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.2e-43 180.6 174 61.5
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 2.0e-43 179.9 175 62.9
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 3.4e-43 179.1 172 59.9
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 7.6e-43 177.9 174 63.2
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 1.3e-42 177.2 174 62.1
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 1.3e-42 177.2 174 62.1
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 1.7e-42 176.8 174 60.9
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 61.5
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 61.5
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 61.5
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.2e-42 176.4 173 61.8
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 62.1
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 62.1
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 2.2e-42 176.4 174 61.5
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 2.9e-42 176.0 174 61.5
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 3.8e-42 175.6 174 62.6
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 5.0e-42 175.3 143 72.0
CAN.G2148.2 Capsicum annuum HOM05D004263 ORTHO05D004931 6.5e-42 174.9 196 55.1
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 6.5e-42 174.9 174 61.5
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 8.5e-42 174.5 174 59.8
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 8.5e-42 174.5 174 61.5
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 1.1e-41 174.1 174 60.9
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 1.4e-41 173.7 174 60.3
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 1.4e-41 173.7 174 60.3
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 1.4e-41 173.7 174 60.9
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 1.4e-41 173.7 174 60.3
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 3.2e-41 172.6 174 59.8
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 3.2e-41 172.6 174 59.8
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 3.2e-41 172.6 174 59.8
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 4.2e-41 172.2 174 59.8
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 4.2e-41 172.2 175 58.3
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 4.2e-41 172.2 174 59.8
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 5.5e-41 171.8 174 59.8
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 5.5e-41 171.8 174 60.9
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 7.2e-41 171.4 174 58.6
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 7.2e-41 171.4 174 59.2
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 7.2e-41 171.4 174 59.8
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 9.3e-41 171.0 174 59.8
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 9.3e-41 171.0 174 59.8
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 1.6e-40 170.2 174 59.8
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 1.6e-40 170.2 174 58.0
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 2.1e-40 169.9 182 57.1
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 2.7e-40 169.5 174 59.8
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 2.7e-40 169.5 174 58.6
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 2.7e-40 169.5 174 59.2
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 3.6e-40 169.1 174 58.0
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 3.6e-40 169.1 174 58.6
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 4.6e-40 168.7 174 59.2
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 6.1e-40 168.3 174 58.0
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 6.1e-40 168.3 174 58.6
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.0e-39 167.5 174 59.8
Nitab4.5_0001514g0010 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.0e-39 167.5 172 58.1
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 1.0e-39 167.5 174 59.2
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 1.3e-39 167.2 174 57.5
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 1.3e-39 167.2 174 58.0
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 1.8e-39 166.8 174 59.8
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 1.8e-39 166.8 172 58.1
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 2.3e-39 166.4 174 58.0
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 2.3e-39 166.4 174 59.2
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 3.9e-39 165.6 174 58.0
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 5.1e-39 165.2 174 57.5
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 5.1e-39 165.2 174 56.9
TPR.G26159 Trifolium pratense HOM05D004263 ORTHO05D004931 5.1e-39 165.2 174 58.6
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 6.7e-39 164.9 175 57.7
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 8.7e-39 164.5 174 58.0
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 8.7e-39 164.5 172 57.6
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 1.1e-38 164.1 174 57.5
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.5e-38 163.7 174 56.3
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 1.5e-38 163.7 174 56.9
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 1.5e-38 163.7 174 58.6
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 1.5e-38 163.7 174 56.3
Nitab4.5_0000025g0490 Nicotiana tabacum HOM05D004263 ORTHO05D004931 1.9e-38 163.3 201 51.2
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 1.9e-38 163.3 174 57.5
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 2.5e-38 162.9 174 58.0
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 2.5e-38 162.9 174 55.7
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 3.3e-38 162.5 174 56.9
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 3.3e-38 162.5 174 56.9
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 5.7e-38 161.8 174 56.3
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 5.7e-38 161.8 175 56.6
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 5.7e-38 161.8 174 56.3
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 5.7e-38 161.8 204 53.4
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 7.4e-38 161.4 174 57.5
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 9.7e-38 161.0 174 57.5
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 9.7e-38 161.0 174 57.5
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 9.7e-38 161.0 174 57.5
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 9.7e-38 161.0 174 57.5
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 9.7e-38 161.0 174 57.5
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 1.6e-37 160.2 175 56.0
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.6e-37 160.2 172 55.8
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 2.2e-37 159.8 174 56.3
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 2.8e-37 159.5 172 56.4
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 6.3e-37 158.3 174 56.9
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 8.2e-37 157.9 174 56.3
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 8.2e-37 157.9 174 56.3
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 3.1e-36 156.0 182 54.4
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 3.1e-36 156.0 182 54.4
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 9.0e-36 154.5 174 54.6
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 2.0e-35 153.3 189 50.8
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 8.5e-34 147.9 163 55.2
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 8.5e-34 147.9 172 54.1
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 1.4e-33 147.1 174 51.1
SHI10474 Sapria himalayana HOM05D004263 ORTHO05D004931 1.4e-31 140.6 174 48.9
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 1.8e-31 140.2 139 59.0
VMungo1080G0385 Vigna mungo HOM05D004263 ORTHO05D004931 3.0e-31 139.4 139 58.3
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 2.0e-30 136.7 182 47.3
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 4.3e-30 135.6 162 49.4
QL08p037237 Quercus lobata HOM05D004263 ORTHO05D004931 5.7e-30 135.2 141 56.7
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 1.7e-29 133.7 138 58.7
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 3.7e-29 132.5 138 58.0
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 2.7e-24 116.3 135 53.3
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 1.5e-22 110.5 178 39.3
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 3.3e-22 109.4 174 40.8
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 3.7e-21 105.9 174 41.4
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 7.0e-20 101.7 174 37.9
SEGI_10945 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 8.0e-16 88.2 80 58.8
Dinv23715 Davidia involucrata HOM05D004263 ORTHO05D004931 9.7e-14 81.3 84 57.1
CBR_g40703 Chara braunii HOM05D004263 ORTHO05D004931 5.9e-11 72.0 80 55.0
MD02G1222100 Malus domestica HOM05D004263 ORTHO05D004931 6.8e-07 58.5 51 62.7


User provided reference genes

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