Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 3.3e-105 385.2 213 100.0
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.2e-41 174.1 233 57.5
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 1.3e-40 170.6 214 49.5
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 7.7e-38 161.4 215 56.3
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 7.7e-38 161.4 231 52.4
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 6.5e-37 158.3 227 52.9
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.1e-35 153.3 239 54.0
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.1e-35 153.3 239 54.0
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.0e-34 151.0 237 53.2
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.3e-34 149.8 205 55.1
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 4.0e-34 149.1 233 49.8
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 4.0e-34 149.1 234 49.1
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 4.4e-33 145.6 215 44.7
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 9.8e-33 144.4 225 49.8
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 2.2e-32 143.3 234 49.1
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 6.3e-32 141.7 235 48.5
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 1.1e-31 141.0 239 45.2
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.4e-31 140.6 228 50.4
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.4e-31 140.6 231 51.1
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 7.0e-31 138.3 225 48.9
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 1.6e-30 137.1 224 50.0
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 2.0e-30 136.7 225 50.2
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.5e-30 136.0 220 50.5
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 4.5e-30 135.6 225 52.4
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 1.7e-29 133.7 228 44.7
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 3.8e-29 132.5 234 45.3
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 6.6e-29 131.7 234 48.3
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 7.3e-28 128.3 216 51.4
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.2e-27 127.5 241 46.5
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.6e-27 127.1 237 47.3
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.6e-27 127.1 223 49.8
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 3.6e-27 125.9 211 41.2
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 3.6e-27 125.9 233 45.9
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 2.3e-26 123.2 225 45.8
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 6.8e-26 121.7 222 48.2
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.2e-25 120.9 230 47.0
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 2.6e-25 119.8 241 44.8
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 9.8e-25 117.9 227 45.4
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 1.3e-24 117.5 239 43.5
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 8.3e-24 114.8 239 44.8
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 8.3e-24 114.8 214 48.6
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 8.3e-24 114.8 229 45.4
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.1e-23 114.4 269 42.0
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.1e-23 114.4 200 42.5
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 1.8e-23 113.6 214 43.9
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 3.2e-23 112.8 232 44.0
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 5.4e-23 112.1 217 46.5
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 5.4e-23 112.1 222 44.1
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.6e-22 110.5 232 43.1
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.6e-22 110.5 232 43.1
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 2.7e-22 109.8 200 43.0
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 7.8e-22 108.2 229 43.7
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 7.8e-22 108.2 236 43.2
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.3e-21 106.7 247 41.3
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.3e-21 106.7 232 43.5
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 5.0e-21 105.5 224 43.8
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 1.1e-20 104.4 211 41.7
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 1.1e-20 104.4 234 45.3
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.9e-20 103.6 218 39.9
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.6e-19 100.5 200 40.5
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.8e-19 99.8 187 50.8
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 6.2e-19 98.6 219 42.9
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 4.0e-18 95.9 210 43.8
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 2.0e-17 93.6 216 34.7
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 3.4e-17 92.8 207 42.5
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 4.4e-17 92.4 170 41.2
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 5.8e-17 92.0 207 42.0
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 2.9e-16 89.7 220 42.3
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 6.4e-16 88.6 168 47.6
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 1.4e-15 87.4 250 38.8
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 4.1e-15 85.9 202 43.6
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 4.1e-15 85.9 250 38.0
Actinidia12799 Actinidia chinensis HOM05D000223 ORTHO05D000736 5.4e-15 85.5 149 52.3
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 5.4e-15 85.5 87 56.3
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 7.0e-15 85.1 208 34.6
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.7e-14 83.2 210 37.6
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 3.5e-14 82.8 236 33.5
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 7.8e-14 81.6 192 38.5
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 7.8e-14 81.6 202 37.1
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 7.8e-14 81.6 192 38.5
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 7.8e-14 81.6 210 41.0
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 1.0e-13 81.3 202 37.6
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.3e-13 80.9 210 41.4
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 6.6e-13 78.6 261 30.3
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 8.6e-13 78.2 262 30.2
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 1.1e-12 77.8 257 30.7
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 1.1e-12 77.8 257 30.7
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 1.1e-12 77.8 257 30.7
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 1.5e-12 77.4 272 29.0
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 1.5e-12 77.4 202 41.1
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.5e-12 76.6 256 29.7
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 3.3e-12 76.3 226 38.5
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 7.3e-12 75.1 205 41.0
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 7.3e-12 75.1 92 57.6
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 9.5e-12 74.7 246 36.6
Rhsim04G0022300 Rhododendron simsii HOM05D058066 ORTHO05D008654 1.2e-11 74.3 221 33.5
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 1.6e-11 73.9 273 29.3
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 3.6e-11 72.8 56 66.1
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 6.2e-11 72.0 215 37.2
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 6.2e-11 72.0 260 38.5
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 6.2e-11 72.0 196 35.7
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 6.2e-11 72.0 245 30.2
Rhsim04G0022200 Rhododendron simsii HOM05D058066 ORTHO05D008654 1.8e-10 70.5 106 39.6
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.3e-10 70.1 267 28.5
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 3.1e-10 69.7 258 29.1
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 6.8e-10 68.6 71 56.3
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 5.8e-09 65.5 78 51.3
DCAR_019565 Daucus carota HOM05D007784 ORTHO05D008654 5.8e-09 65.5 212 39.2
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 7.5e-09 65.1 238 33.2
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 7.5e-09 65.1 250 29.6
DCAR_019564 Daucus carota HOM05D007784 ORTHO05D008654 2.9e-08 63.2 205 41.5
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 8.3e-08 61.6 269 34.6
Eucgr.F03301 Eucalyptus grandis HOM05D007784 ORTHO05D008654 7.1e-07 58.5 164 43.9
DCAR_013118 Daucus carota HOM05D007784 ORTHO05D008654 4.6e-06 55.8 103 35.9


User provided reference genes

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