Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 3013.0 1494 100.0
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 2234.9 1547 74.2
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 2224.5 1556 74.6
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 2104.7 1529 72.1
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1952.2 1528 66.0
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1942.9 1529 66.4
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1933.7 1527 65.7
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1867.4 1533 64.2
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1865.9 1527 63.7
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1858.2 1528 63.7
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1840.9 1514 63.3
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1838.9 1356 71.8
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1828.1 1480 64.6
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1825.8 1488 64.4
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1822.4 1535 63.6
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1815.0 1523 63.2
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1814.7 1566 62.2
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1814.3 1534 62.4
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1813.9 1530 62.2
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1803.1 1543 61.9
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1801.2 1534 62.3
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1799.6 1531 62.2
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1790.8 1531 62.1
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1788.9 1618 59.2
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1775.0 1490 63.4
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1769.2 1514 60.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1766.1 1415 65.2
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1756.5 1562 60.8
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1747.6 1610 58.4
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1746.5 1529 60.3
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1740.3 1569 60.4
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1714.9 1531 58.9
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1712.6 1528 59.0
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1691.8 1535 58.8
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1688.7 1539 59.0
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1662.9 1511 57.8
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1661.7 1547 57.1
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1658.3 1530 57.3
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1651.3 1498 58.3
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1650.6 1509 57.8
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1649.4 1522 58.1
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1646.7 1523 58.0
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1643.6 1547 56.8
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1641.7 1529 57.4
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1637.9 1524 57.7
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1637.9 1523 57.6
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1635.9 1572 56.0
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1632.5 1495 58.9
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1632.5 1522 57.0
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1629.8 1524 57.2
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1629.0 1523 57.4
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1627.8 1522 58.0
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1624.0 1533 57.0
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1614.7 1544 56.4
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1612.0 1519 57.1
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1612.0 1509 57.5
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1611.7 1521 57.0
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1607.4 1570 55.9
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1605.1 1514 57.3
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1600.5 1520 55.9
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1598.9 1524 56.6
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1598.9 1524 56.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1590.1 1529 55.7
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1576.6 1513 56.2
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1575.1 1548 56.7
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1557.7 1531 55.2
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1557.0 1502 55.3
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1552.3 1365 61.8
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1550.8 1522 55.1
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1548.9 1496 55.7
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1541.2 1547 54.7
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1535.8 1516 54.4
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1529.6 1525 54.6
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1525.4 1523 54.6
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1521.1 1516 54.9
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1519.6 1530 53.9
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1514.2 1513 54.5
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1511.5 1535 54.3
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1506.9 1506 53.7
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1504.2 1522 54.3
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1504.2 1522 54.3
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1498.0 1552 53.3
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1495.3 1581 53.2
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1494.6 1541 53.7
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1487.6 1527 53.7
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1397.1 1413 53.9
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1382.9 1584 49.6
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1322.4 1367 52.9
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1291.9 1312 53.8
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1289.2 1523 48.5
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1285.0 1557 47.5
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1278.5 1456 50.1
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1263.8 1127 59.9
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 0.0e+00 1171.0 1554 44.2
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1163.3 1114 57.7
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 3.8e-309 1065.4 1007 55.9
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 2.7e-270 936.4 1627 37.4
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 6.1e-222 775.8 917 46.7
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.1e-206 724.2 483 79.9
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 2.3e-189 667.5 485 72.0
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 5.0e-176 623.2 1517 31.2
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 9.2e-162 575.9 1035 36.5
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 9.0e-149 532.7 695 44.0
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 1.2e-113 416.0 400 56.5
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.5e-76 291.2 595 32.6
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 2.8e-65 255.4 184 64.1
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 6.6e-51 207.6 163 66.9
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 5.8e-39 167.9 107 72.0
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 8.1e-33 147.5 93 71.0
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.4e-32 146.7 91 75.8
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 8.4e-30 137.5 89 68.5
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 1.7e-27 129.8 81 70.4
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 1.6e-25 123.2 76 80.3
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.4e-21 110.2 87 65.5
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.4e-21 110.2 87 65.5
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 9.3e-21 107.5 67 83.6
Actinidia33727 Actinidia chinensis HOM05D006693 ORTHO05D008092 8.1e-17 94.4 67 65.7
Sc08g0007060 Simmondsia chinensis HOM05D000836 ORTHO05D000709 1.7e-06 60.1 239 23.0
Sabra01G0074000 Salix brachista HOM05D000115 ORTHO05D000464 8.4e-06 57.8 71 49.3


User provided reference genes

Program Settings