Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 9.3e-65 250.4 126 100.0
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 5.3e-28 128.3 126 57.9
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 2.0e-27 126.3 126 57.9
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 7.2e-25 117.9 126 53.2
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 2.3e-23 112.8 126 50.0
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 2.5e-17 92.8 127 48.8
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 1.4e-15 87.0 97 51.5
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 4.4e-14 82.0 105 46.7
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 5.7e-14 81.6 105 41.9
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 3.7e-13 79.0 125 42.4
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 3.7e-13 79.0 117 40.2
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 6.3e-13 78.2 126 42.9
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 6.3e-13 78.2 120 39.2
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 1.4e-12 77.0 120 36.7
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 1.2e-11 73.9 104 42.3
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 2.0e-11 73.2 105 46.7
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 2.0e-11 73.2 132 37.9
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 7.8e-11 71.2 112 44.6
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 2.9e-10 69.3 119 37.8
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 3.8e-10 68.9 131 38.2
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 2.5e-09 66.2 99 34.3
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 4.3e-09 65.5 100 39.0
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 4.3e-09 65.5 103 36.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 5.6e-09 65.1 114 39.5
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 7.3e-09 64.7 113 37.2
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 1.6e-08 63.5 104 38.5
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 1.6e-08 63.5 127 34.6
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 2.8e-08 62.8 100 40.0
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 4.7e-08 62.0 101 39.6
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 4.7e-08 62.0 101 39.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 6.1e-08 61.6 121 36.4
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 8.0e-08 61.2 116 36.2
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 1.4e-07 60.5 100 39.0
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 2.3e-07 59.7 118 37.3
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.0e-07 58.9 127 33.9
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 5.2e-07 58.5 106 36.8
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 5.2e-07 58.5 119 33.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 5.2e-07 58.5 126 37.3
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 6.8e-07 58.2 110 34.5
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 8.9e-07 57.8 68 38.2
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.2e-06 57.4 115 33.0
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.2e-06 57.4 105 37.1
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.2e-06 57.4 106 35.8
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 2.0e-06 56.6 119 33.6
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 2.6e-06 56.2 121 35.5
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 3.4e-06 55.8 121 33.9
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 3.4e-06 55.8 60 43.3
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 4.4e-06 55.5 82 41.5
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 4.4e-06 55.5 104 33.7


User provided reference genes

Program Settings