Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 6.1e-157 557.4 269 100.0
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.0e-131 472.6 246 94.3
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 4.2e-81 305.4 258 64.7
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 3.5e-80 302.4 259 61.8
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 8.2e-77 291.2 248 61.3
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 3.0e-63 246.1 290 49.7
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 4.8e-61 238.8 267 49.4
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 1.1e-60 237.7 247 53.8
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 6.9e-60 235.0 254 50.8
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 1.2e-59 234.2 267 50.6
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 2.6e-59 233.0 250 53.6
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 2.6e-59 233.0 250 53.6
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 7.7e-59 231.5 263 49.4
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.7e-58 230.3 261 49.8
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.1e-57 227.6 124 91.1
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.5e-57 226.5 259 50.6
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 2.5e-57 226.5 259 50.6
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 2.1e-56 223.4 260 49.2
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 1.0e-55 221.1 241 53.5
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 5.2e-55 218.8 274 43.8
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.5e-54 217.2 244 50.4
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 2.0e-54 216.9 229 53.7
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 2.8e-53 213.0 244 52.0
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.1e-52 211.1 232 48.3
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 3.1e-52 209.5 232 47.8
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 9.1e-52 208.0 284 43.3
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 3.5e-51 206.1 219 53.0
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 5.9e-51 205.3 250 46.8
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 7.7e-51 204.9 278 42.8
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.3e-50 204.1 218 51.4
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.3e-50 204.1 245 46.5
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 8.5e-50 201.4 231 50.6
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.5e-49 200.7 274 45.6
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 2.5e-49 199.9 256 45.3
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 3.2e-49 199.5 282 41.8
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 4.2e-49 199.1 257 46.7
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 4.2e-49 199.1 256 44.1
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 5.5e-49 198.7 296 43.6
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 7.2e-49 198.4 251 47.4
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 6.1e-48 195.3 214 50.5
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.0e-48 194.9 231 49.8
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 3.0e-47 193.0 222 50.0
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 3.0e-47 193.0 270 45.6
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 4.0e-47 192.6 207 51.7
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 9.7e-46 188.0 286 40.6
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.3e-45 187.6 246 45.9
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 1.7e-45 187.2 219 51.1
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 3.7e-45 186.0 253 44.7
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 1.4e-44 184.1 267 43.8
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.1e-44 183.0 288 41.7
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 7.0e-44 181.8 270 43.0
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 3.5e-43 179.5 261 43.7
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 4.5e-43 179.1 221 45.7
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 7.7e-43 178.3 294 39.8
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.2e-42 176.8 305 39.3
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 5.0e-42 175.6 214 48.1
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 6.5e-42 175.3 206 51.5
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 8.5e-42 174.9 243 43.6
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 8.5e-42 174.9 210 50.5
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.1e-41 174.5 200 50.0
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.5e-41 174.1 192 50.5
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 3.2e-41 172.9 253 44.3
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 5.5e-41 172.2 217 46.1
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 7.2e-41 171.8 209 48.8
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 7.2e-41 171.8 249 44.6
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 9.4e-41 171.4 304 38.8
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 4.7e-40 169.1 214 45.8
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 6.1e-40 168.7 212 46.2
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 8.8e-39 164.9 290 38.3
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 2.0e-38 163.7 200 47.0
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 2.0e-38 163.7 200 47.0
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 2.6e-38 163.3 233 42.1
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 7.5e-38 161.8 77 98.7
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 7.5e-38 161.8 215 46.0
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 7.5e-38 161.8 288 36.5
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 7.5e-38 161.8 176 51.7
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.7e-37 160.6 229 41.9
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 6.3e-37 158.7 314 36.3
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 6.3e-37 158.7 284 37.7
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 3.1e-36 156.4 200 46.0
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 3.1e-36 156.4 200 46.0
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 9.1e-36 154.8 236 39.4
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 3.8e-34 149.4 284 36.6
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 6.5e-34 148.7 201 43.8
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.8e-32 143.3 246 37.0
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.6e-32 142.9 129 57.4
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.4e-31 141.0 288 36.5
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 4.0e-31 139.4 250 39.2
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 8.8e-31 138.3 214 39.3
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 7.0e-28 128.6 125 54.4
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 7.0e-28 128.6 223 39.0
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 2.3e-26 123.6 116 52.6
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 5.6e-25 119.0 157 43.9
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.6e-24 117.5 216 39.8
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.0e-23 114.8 303 31.0
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.8e-20 104.0 123 48.0
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 9.2e-20 101.7 243 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 5.0e-18 95.9 98 46.9
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.1e-15 86.7 100 45.0
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 8.9e-15 85.1 132 37.1
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 2.0e-14 84.0 131 39.7
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 1.4e-12 77.8 124 41.9
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 1.3e-10 71.2 162 32.1
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 5.0e-10 69.3 81 46.9
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 7.3e-09 65.5 36 83.3
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 2.0e-06 57.4 159 28.3


User provided reference genes

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