Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.1e-139 500.0 256 100.0
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 5.9e-101 371.3 233 84.5
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.5e-93 345.1 192 92.7
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.7e-79 300.1 158 94.9
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 3.9e-76 288.9 189 76.7
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 4.3e-75 285.4 209 69.4
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 1.6e-74 283.5 215 67.4
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 4.7e-74 282.0 186 74.2
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.1e-73 280.8 215 69.3
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 5.2e-73 278.5 193 72.5
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 6.8e-73 278.1 183 74.9
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 6.8e-73 278.1 192 71.4
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 1.2e-72 277.3 193 72.0
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 2.6e-72 276.2 191 72.8
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 1.3e-71 273.9 193 70.5
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.3e-71 273.9 186 73.7
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 1.7e-71 273.5 191 69.6
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.7e-71 273.5 193 72.5
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 2.2e-71 273.1 209 67.9
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.9e-71 272.7 195 72.8
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 3.7e-71 272.3 191 70.7
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 8.3e-71 271.2 211 67.3
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 1.1e-70 270.8 184 72.3
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 1.1e-70 270.8 216 65.3
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 1.1e-70 270.8 192 70.3
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 1.1e-70 270.8 191 70.7
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.9e-70 270.0 192 70.8
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 2.4e-70 269.6 211 67.3
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 3.2e-70 269.2 181 72.4
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 3.2e-70 269.2 188 69.7
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 4.1e-70 268.9 215 64.7
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 4.1e-70 268.9 213 65.7
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 4.1e-70 268.9 188 71.8
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 4.1e-70 268.9 188 70.7
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 7.0e-70 268.1 216 64.8
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 7.0e-70 268.1 210 64.3
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 9.2e-70 267.7 223 65.0
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.2e-69 267.3 185 71.9
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 1.6e-69 266.9 192 70.8
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 2.1e-69 266.5 209 63.6
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.1e-69 266.5 216 63.9
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 2.1e-69 266.5 169 78.1
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.7e-69 266.2 216 63.9
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 3.5e-69 265.8 174 74.1
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 3.5e-69 265.8 192 69.3
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 6.0e-69 265.0 210 63.8
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 6.0e-69 265.0 215 63.7
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 1.3e-68 263.8 191 69.1
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 1.3e-68 263.8 184 70.7
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.3e-68 263.8 185 67.6
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.7e-68 263.5 184 70.7
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 3.0e-68 262.7 191 68.6
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 3.0e-68 262.7 190 68.4
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 3.0e-68 262.7 190 68.4
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 3.9e-68 262.3 186 67.2
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 3.9e-68 262.3 185 69.2
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 8.6e-68 261.2 213 63.4
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 8.6e-68 261.2 190 68.4
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 8.6e-68 261.2 191 66.0
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.1e-67 260.8 190 66.3
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 1.1e-67 260.8 215 61.4
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.5e-67 260.4 190 66.8
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 1.5e-67 260.4 210 63.3
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 1.5e-67 260.4 180 70.0
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 1.9e-67 260.0 189 66.7
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 2.5e-67 259.6 189 67.7
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 3.3e-67 259.2 187 69.0
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 5.6e-67 258.5 191 67.0
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 5.6e-67 258.5 201 65.2
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 7.3e-67 258.1 191 68.1
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 7.3e-67 258.1 185 68.6
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 9.5e-67 257.7 210 62.4
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 1.6e-66 256.9 188 67.6
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 1.6e-66 256.9 207 62.8
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 1.6e-66 256.9 187 66.8
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 2.1e-66 256.5 208 64.4
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 2.1e-66 256.5 184 67.9
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 2.1e-66 256.5 185 65.9
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 2.8e-66 256.1 209 64.1
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 2.8e-66 256.1 186 66.7
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 8.1e-66 254.6 185 65.9
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 1.1e-65 254.2 191 64.4
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 1.4e-65 253.8 191 67.0
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 1.8e-65 253.4 180 67.8
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 3.1e-65 252.7 183 67.2
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 3.1e-65 252.7 188 65.4
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 5.2e-65 251.9 192 68.2
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 6.8e-65 251.5 213 63.4
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 8.9e-65 251.1 210 61.0
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 8.9e-65 251.1 188 64.4
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 1.5e-64 250.4 212 63.7
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 1.5e-64 250.4 201 63.2
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.5e-64 250.4 188 66.0
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 3.4e-64 249.2 191 64.4
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 4.4e-64 248.8 207 61.8
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 4.4e-64 248.8 212 63.2
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 4.4e-64 248.8 185 62.7
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 5.8e-64 248.4 186 66.7
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 9.9e-64 247.7 209 59.8
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 9.9e-64 247.7 210 61.0
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 3.7e-63 245.7 185 65.4
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 6.4e-63 245.0 212 59.0
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.1e-62 242.3 205 63.9
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 4.1e-62 242.3 170 69.4
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 5.4e-62 241.9 209 58.4
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 7.1e-62 241.5 189 64.6
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 9.2e-62 241.1 191 62.8
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.2e-61 240.7 205 63.4
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 2.1e-61 240.0 215 57.2
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 2.7e-61 239.6 209 58.4
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 2.7e-61 239.6 209 58.4
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.0e-60 237.7 215 57.2
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 2.3e-60 236.5 215 56.3
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 3.9e-60 235.7 215 56.3
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 6.6e-60 235.0 193 60.1
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 6.6e-60 235.0 215 57.7
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 8.6e-60 234.6 175 66.9
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.5e-59 233.8 215 56.3
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 1.5e-59 233.8 215 56.3
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 1.5e-59 233.8 215 56.3
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 3.3e-59 232.6 193 59.1
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 4.3e-59 232.3 191 58.6
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 5.6e-59 231.9 215 55.8
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.6e-58 230.3 215 56.7
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 2.8e-58 229.6 218 58.7
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 3.6e-58 229.2 215 56.3
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 6.2e-58 228.4 215 56.3
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 6.2e-58 228.4 215 56.3
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 8.1e-58 228.0 215 55.8
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 8.1e-58 228.0 235 55.3
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 8.1e-58 228.0 188 61.2
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.4e-57 227.3 192 59.9
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 1.8e-57 226.9 192 58.3
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 3.1e-57 226.1 186 62.9
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 4.0e-57 225.7 178 60.7
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 8.9e-57 224.6 219 56.6
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.5e-56 223.8 191 59.7
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.6e-56 223.0 182 64.8
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 1.7e-55 220.3 215 54.4
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 3.8e-55 219.2 174 59.8
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 4.9e-55 218.8 187 57.2
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 7.1e-54 214.9 192 55.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 2.1e-53 213.4 193 54.9
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 3.5e-53 212.6 192 55.2
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 1.3e-52 210.7 186 57.0
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 2.3e-52 209.9 191 56.5
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 5.1e-52 208.8 192 56.8
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 1.9e-51 206.8 218 49.1
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 1.6e-50 203.8 210 54.8
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 1.8e-49 200.3 170 52.9
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 4.9e-47 192.2 185 48.6
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 2.0e-40 170.2 178 51.7
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.0e-36 157.9 143 57.3
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 8.1e-34 148.3 124 62.9
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 5.8e-32 142.1 186 44.1
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 1.1e-30 137.9 128 55.5
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 1.1e-30 137.9 114 57.9
Potri.004G157900 Populus trichocarpa HOM05D000626 ORTHO05D003868 6.0e-29 132.1 135 51.9
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 8.2e-26 121.7 110 54.5
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 1.8e-25 120.6 98 61.2
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 1.5e-24 117.5 185 36.2
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 7.6e-24 115.2 86 65.1
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 2.9e-23 113.2 105 58.1
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 1.9e-19 100.5 137 43.8
HanXRQChr05g0134001 Helianthus annuus HOM05D000626 ORTHO05D003868 8.2e-18 95.1 62 72.6
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 4.1e-17 92.8 87 55.2
HPP92_010240 Vanilla planifolia HOM05D000626 ORTHO05D003868 3.8e-15 86.3 59 71.2
QL11p042736 Quercus lobata HOM05D000626 ORTHO05D003868 7.2e-14 82.0 59 67.8
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 1.0e-12 78.2 108 43.5
Cfa019187 Carpinus fangiana HOM05D003289 ORTHO05D034141 5.1e-12 75.9 48 75.0
Potri.009G112922 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.3e-10 71.2 69 58.0
Potri.T125804 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.3e-10 71.2 69 58.0
Cpa.g.sc43.144 Carica papaya HOM05D000626 ORTHO05D003868 6.3e-10 68.9 52 61.5


User provided reference genes

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