Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 0.0e+00 1264.6 697 100.0
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 0.0e+00 1225.7 681 99.3
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 1.5e-239 833.2 681 68.6
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 2.7e-220 769.2 681 64.5
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 1.5e-218 763.5 683 62.2
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 5.5e-218 761.5 683 62.1
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 5.5e-218 761.5 679 62.9
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 1.3e-214 750.4 686 58.6
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 2.0e-212 743.0 723 60.7
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 1.0e-211 740.7 678 58.6
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 1.1e-210 737.3 679 61.6
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 1.1e-210 737.3 683 58.9
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 1.6e-209 733.4 694 60.2
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 9.8e-207 724.2 715 61.4
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 8.3e-206 721.1 683 58.4
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 5.9e-204 714.9 706 59.1
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 6.6e-203 711.4 814 54.3
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 3.6e-201 705.7 682 60.0
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 8.0e-201 704.5 676 57.7
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 5.2e-200 701.8 739 56.4
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 2.0e-199 699.9 635 64.6
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 2.9e-198 696.0 683 57.2
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 1.8e-197 693.3 680 57.6
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 2.3e-195 686.4 669 57.7
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 3.0e-195 686.0 680 58.7
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 1.6e-193 680.2 698 56.3
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 3.6e-193 679.1 681 57.3
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 2.9e-190 669.5 719 57.4
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 2.4e-189 666.4 806 50.0
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 1.2e-188 664.1 696 55.7
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 1.3e-187 660.6 693 54.4
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 5.0e-187 658.7 716 55.7
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 6.6e-187 658.3 684 59.5
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 6.6e-187 658.3 658 55.9
GSVIVG01030533001 Vitis vinifera HOM05D006530 ORTHO05D008283 7.3e-186 654.8 648 59.3
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 1.2e-185 654.1 693 53.8
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 5.2e-184 648.7 794 49.6
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 3.4e-183 646.0 692 55.3
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 2.1e-180 636.7 698 52.7
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 6.0e-180 635.2 716 52.9
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 1.6e-177 627.1 678 52.5
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 2.8e-177 626.3 674 52.5
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 3.6e-177 625.9 705 52.8
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 3.4e-175 619.4 673 52.6
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 8.4e-174 614.8 673 52.7
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.4e-173 613.2 680 53.7
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 5.4e-173 612.1 692 52.7
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 1.3e-171 607.4 698 54.0
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 1.7e-171 607.1 675 51.7
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 1.7e-171 607.1 700 50.0
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 5.6e-170 602.1 674 50.9
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 6.2e-169 598.6 673 51.6
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 6.2e-169 598.6 690 51.6
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 4.0e-168 595.9 611 54.7
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 5.2e-168 595.5 679 50.8
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 5.2e-168 595.5 684 50.7
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 2.0e-167 593.6 684 51.6
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 2.6e-167 593.2 687 52.5
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 1.3e-166 590.9 678 50.6
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 2.9e-166 589.7 686 51.9
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 3.2e-165 586.3 665 51.9
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 5.4e-165 585.5 679 52.3
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 7.8e-164 581.6 713 49.2
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 1.0e-163 581.3 688 51.7
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 1.7e-163 580.5 676 49.7
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 3.9e-163 579.3 690 51.6
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 8.7e-163 578.2 682 54.1
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 1.6e-161 573.9 704 51.1
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 2.1e-161 573.5 688 51.2
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 1.1e-160 571.2 676 48.4
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 1.1e-160 571.2 678 49.6
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 1.8e-160 570.5 679 49.3
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 3.1e-160 569.7 676 49.9
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 6.9e-160 568.5 837 45.5
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 1.7e-158 563.9 677 48.9
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 1.7e-158 563.9 678 48.5
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 8.4e-158 561.6 686 48.5
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 1.2e-156 557.8 674 49.9
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 6.0e-156 555.4 716 46.5
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 1.8e-155 553.9 681 48.6
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 4.8e-153 545.8 676 47.5
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 4.0e-152 542.7 796 43.5
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 2.6e-151 540.0 676 47.6
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 1.1e-149 534.6 669 48.4
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 2.4e-149 533.5 666 48.3
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 1.2e-148 531.2 667 47.8
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 2.3e-147 526.9 670 46.6
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 2.3e-147 526.9 670 46.6
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 6.2e-145 518.8 775 43.6
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 1.1e-144 518.1 675 49.6
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 9.3e-141 505.0 669 45.7
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 1.3e-139 501.1 804 45.1
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 6.3e-137 492.3 668 45.2
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 5.3e-136 489.2 381 66.4
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 5.5e-133 479.2 678 45.0
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 4.3e-130 469.5 632 46.7
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 3.7e-113 413.3 789 37.3
Pp3c20_8530 Physcomitrium patens HOM05D006530 ORTHO05D008283 6.5e-110 402.5 713 38.6
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 6.3e-105 386.0 338 58.9
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 1.2e-103 381.7 347 56.8
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 2.3e-94 350.9 570 41.4
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis HOM05D006530 ORTHO05D008283 5.0e-94 349.7 730 39.0
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 2.5e-93 347.4 685 36.9
TPR.G7490 Trifolium pratense HOM05D006530 ORTHO05D008283 6.4e-81 306.2 470 43.4
Mapoly0071s0087 Marchantia polymorpha HOM05D006530 ORTHO05D008283 1.4e-80 305.1 415 45.3
TPR.G22470 Trifolium pratense HOM05D006530 ORTHO05D008283 7.8e-79 299.3 198 72.2
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 3.5e-71 273.9 690 34.8
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 1.3e-65 255.4 678 32.9
FAN03G2558 Fragaria x ananassa HOM05D006530 ORTHO05D008283 4.2e-48 197.2 146 67.1
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 3.1e-43 181.0 317 37.2
Cre16.g684000 Chlamydomonas reinhardtii HOM05D006530 ORTHO05D008283 1.3e-38 165.6 318 33.3
FAN15G1469 Fragaria x ananassa HOM05D006530 ORTHO05D008283 1.9e-37 161.8 118 67.8
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 1.9e-37 161.8 118 67.8
FAN27G2805 Fragaria x ananassa HOM05D006530 ORTHO05D008283 1.9e-37 161.8 118 67.8
SEGI_11846 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 2.9e-33 147.9 120 54.2
Cfa025683 Carpinus fangiana HOM05D006530 ORTHO05D008283 9.7e-21 106.3 287 29.6
BcaB06g26964 Brassica carinata HOM05D006530 ORTHO05D008283 1.8e-19 102.1 81 58.0
SGA_v2.0_scaffold112G31585 Striga asiatica HOM05D006530 ORTHO05D008283 3.2e-16 91.3 70 58.6
SHI10239 Sapria himalayana HOM05D006530 ORTHO05D008283 4.3e-13 80.9 112 42.9
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 6.9e-11 73.6 170 32.4
FvH4_3g29470 Fragaria vesca HOM05D003423 ORTHO05D003910 1.2e-10 72.8 166 32.5
RcHm_v2.0_Chr5g0054021 Rosa chinensis HOM05D003423 ORTHO05D003910 2.6e-10 71.6 166 31.9
SGA_v2.0_scaffold42G16002 Striga asiatica HOM05D003423 ORTHO05D003910 2.6e-10 71.6 182 30.8
MD11G1201700 Malus domestica HOM05D003423 ORTHO05D003910 7.7e-10 70.1 166 31.9
SMO361G0751 Selaginella moellendorffii HOM05D003423 ORTHO05D003910 1.0e-09 69.7 184 31.0
Hund01908 Selenicereus undatus HOM05D003423 ORTHO05D003910 1.0e-09 69.7 174 30.5
EL10Ac4g07604 Beta vulgaris HOM05D003423 ORTHO05D003910 1.7e-09 68.9 177 29.4
TWI39G0701 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 2.2e-09 68.6 113 35.4
MBI19_g29441_MAGBIO Magnolia biondii HOM05D006530 ORTHO05D008283 2.9e-09 68.2 327 29.4
Eucgr.F02068 Eucalyptus grandis HOM05D003423 ORTHO05D003910 3.8e-09 67.8 177 28.8
CDE04G0040 Ceratophyllum demersum HOM05D003423 ORTHO05D003910 5.0e-09 67.4 105 39.0
Prupe.4G239900 Prunus persica HOM05D003423 ORTHO05D003910 5.0e-09 67.4 110 36.4
FAN25G2240 Fragaria x ananassa HOM05D003423 ORTHO05D003910 8.5e-09 66.6 167 32.3
ATR0580G345 Amborella trichopoda HOM05D003423 ORTHO05D003910 1.1e-08 66.2 187 31.6
FAN11G0659 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.4e-08 65.9 166 30.7
FAN21G0447 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.4e-08 65.9 166 30.7
PSO782G1032 Papaver somniferum HOM05D003423 ORTHO05D003910 1.4e-08 65.9 120 31.7
HanXRQChr11g0333391 Helianthus annuus HOM05D003423 ORTHO05D003910 1.9e-08 65.5 192 31.2
PSO063G5220 Papaver somniferum HOM05D003423 ORTHO05D003910 1.9e-08 65.5 121 33.1
Potri.011G092900 Populus trichocarpa HOM05D003423 ORTHO05D003910 1.9e-08 65.5 172 29.1
TAR624G0752 Trochodendron aralioides HOM05D003423 ORTHO05D003910 1.9e-08 65.5 109 35.8
ECA236G2484 Erigeron canadensis HOM05D003423 ORTHO05D003910 2.5e-08 65.1 168 31.0
Lj1A888G39 Lonicera japonica HOM05D003423 ORTHO05D003910 2.5e-08 65.1 180 29.4
Medtr3g058580 Medicago truncatula HOM05D003423 ORTHO05D003910 2.5e-08 65.1 170 29.4
Oeu041432.1 Olea europaea HOM05D003423 ORTHO05D003910 2.5e-08 65.1 120 31.7
Cfa022425 Carpinus fangiana HOM05D003423 ORTHO05D003910 4.2e-08 64.3 121 33.9
AagrBONN_evm.TU.Sc2ySwM_228.5488 Anthoceros agrestis HOM05D003423 ORTHO05D003910 5.5e-08 63.9 92 40.2
CBR_g12763 Chara braunii HOM05D003423 ORTHO05D003910 7.2e-08 63.5 93 38.7
Aqoxy6G02866 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 9.4e-08 63.2 170 30.0
SEGI_36313 Sequoiadendron giganteum HOM05D003423 ORTHO05D003910 9.4e-08 63.2 99 38.4
HanXRQChr09g0277351 Helianthus annuus HOM05D003423 ORTHO05D003910 1.6e-07 62.4 150 31.3
A03p41860 Brassica napus HOM05D003344 ORTHO05D003981 2.1e-07 62.0 101 39.6
Eucgr.F03997 Eucalyptus grandis HOM05D003423 ORTHO05D003910 2.1e-07 62.0 92 39.1
Lj9A540T81 Lonicera japonica HOM05D003423 ORTHO05D003910 2.1e-07 62.0 92 40.2
Sed0010386 Sechium edule HOM05D003423 ORTHO05D003910 2.1e-07 62.0 149 31.5
Oeu051387.2 Olea europaea HOM05D003423 ORTHO05D003910 2.7e-07 61.6 92 39.1
PRCOL_00000756 Prasinoderma coloniale HOM05D003423 ORTHO05D003910 2.7e-07 61.6 124 32.3
Nn3g19300 Nelumbo nucifera HOM05D003423 ORTHO05D003910 3.6e-07 61.2 91 36.3
Pp3c5_3280 Physcomitrium patens HOM05D003423 ORTHO05D003910 3.6e-07 61.2 171 30.4
Os06g0191200 Oryza sativa ssp. japonica HOM05D003423 ORTHO05D003910 6.1e-07 60.5 174 30.5
ClCG04G000610 Citrullus lanatus HOM05D003423 ORTHO05D003910 7.9e-07 60.1 92 37.0
MELO3C009034.2 Cucumis melo HOM05D003423 ORTHO05D003910 7.9e-07 60.1 165 30.9
HPP92_018337 Vanilla planifolia HOM05D003423 ORTHO05D003910 1.0e-06 59.7 183 27.3
SHI10236 Sapria himalayana HOM05D006530 ORTHO05D008283 2.3e-06 58.5 72 44.4


User provided reference genes

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