Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 2.1e-183 645.6 326 100.0
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 1.9e-168 595.9 323 91.6
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 2.9e-153 545.4 320 84.1
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 7.2e-152 540.8 326 86.2
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.6e-151 539.7 322 85.1
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 6.7e-150 534.3 326 82.8
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 8.8e-150 533.9 318 83.3
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 2.0e-149 532.7 323 83.0
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 7.4e-149 530.8 318 82.4
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 4.8e-148 528.1 319 81.5
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.1e-147 526.9 319 81.2
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.1e-147 525.0 314 83.8
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.2e-146 523.5 319 81.5
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 4.5e-146 521.5 324 80.6
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 1.0e-145 520.4 319 80.9
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 1.3e-145 520.0 318 83.3
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 2.2e-145 519.2 318 83.0
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 2.2e-145 519.2 328 80.8
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.5e-144 515.8 318 80.2
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 3.2e-144 515.4 323 80.8
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 3.2e-144 515.4 328 79.0
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 4.2e-144 515.0 326 79.4
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 9.4e-144 513.8 318 80.2
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 1.6e-143 513.1 318 81.1
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 6.1e-143 511.1 319 79.9
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 1.0e-142 510.4 326 78.5
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.3e-142 509.2 326 78.8
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 3.0e-142 508.8 326 78.2
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 6.7e-142 507.7 328 78.4
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.1e-141 506.9 415 66.5
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 2.0e-141 506.1 327 77.4
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.0e-141 506.1 321 78.8
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 2.6e-141 505.8 328 78.0
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.8e-139 499.6 321 79.4
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 3.1e-139 498.8 321 78.8
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 5.9e-138 494.6 326 74.2
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 1.7e-137 493.0 318 77.4
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 2.2e-137 492.7 320 76.6
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 2.2e-137 492.7 266 91.4
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 2.9e-137 492.3 318 77.0
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 6.5e-137 491.1 320 76.2
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 8.5e-137 490.7 348 72.4
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.1e-136 490.3 320 75.6
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.9e-136 489.6 322 77.3
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 2.5e-136 489.2 325 75.1
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 2.5e-136 489.2 328 75.0
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.6e-135 486.5 334 74.0
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.7e-135 485.7 315 78.7
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.4e-134 483.4 325 74.5
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 1.4e-134 483.4 325 74.5
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.4e-134 483.4 329 73.9
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 4.4e-133 478.4 319 75.2
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 4.4e-133 478.4 328 72.6
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 4.4e-133 478.4 328 72.6
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 7.5e-133 477.6 313 78.6
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 9.7e-133 477.2 318 74.2
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 6.3e-132 474.6 298 82.2
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 1.1e-131 473.8 324 73.1
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.4e-131 473.4 318 78.3
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 4.5e-130 468.4 319 72.7
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 7.7e-130 467.6 303 76.6
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 5.0e-129 464.9 322 73.3
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 1.2e-127 460.3 322 75.5
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 1.0e-126 457.2 319 72.4
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 2.3e-126 456.1 326 72.4
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 2.3e-126 456.1 283 79.2
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 6.8e-126 454.5 314 74.5
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.5e-125 453.4 317 71.6
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 2.0e-125 453.0 318 70.8
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.4e-123 446.8 319 69.3
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.6e-122 443.4 319 68.0
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 2.0e-122 443.0 310 70.3
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 4.5e-122 441.8 320 69.1
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 7.7e-122 441.0 319 67.7
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.3e-121 440.3 319 67.7
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 3.8e-121 438.7 319 67.4
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 5.0e-121 438.3 320 70.0
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 6.5e-121 438.0 320 68.4
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 1.9e-120 436.4 322 70.2
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 4.2e-120 435.3 326 66.9
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 7.2e-120 434.5 319 67.1
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 2.3e-118 429.5 323 67.8
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 5.7e-117 424.9 321 65.4
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 9.8e-117 424.1 286 77.3
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.3e-116 423.7 318 68.6
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.7e-116 423.3 239 85.8
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.7e-116 423.3 318 68.2
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 1.8e-115 419.9 310 69.0
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 3.1e-115 419.1 314 65.9
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 5.4e-115 418.3 311 68.2
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 9.2e-115 417.5 347 59.4
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 4.5e-114 415.2 302 67.9
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 5.9e-114 414.8 243 84.4
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 5.0e-113 411.8 295 74.2
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 2.8e-111 406.0 334 64.1
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 5.7e-109 398.3 267 73.4
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 4.9e-108 395.2 325 63.1
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 5.0e-105 385.2 310 63.9
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 4.0e-102 375.6 319 59.9
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 1.7e-100 370.2 319 65.2
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 9.5e-88 327.8 194 82.0
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 2.3e-57 226.9 241 56.8
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.5e-50 203.0 140 70.7
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 3.1e-46 189.9 319 36.1
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.7e-44 184.1 251 45.4
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 1.1e-43 181.4 217 48.8
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.4e-43 181.0 328 38.1
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 2.1e-42 177.2 306 35.0
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 4.6e-42 176.0 315 37.1
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 7.9e-42 175.3 310 37.4
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.0e-41 174.9 139 63.3
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.4e-41 174.5 320 32.5
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 3.3e-40 169.9 182 51.6
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 8.2e-31 138.7 138 54.3
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 3.9e-25 119.8 233 36.9
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 6.7e-25 119.0 77 75.3


User provided reference genes

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