Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.0e-75 286.6 136 100.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 3.0e-43 178.7 152 63.8
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.9e-42 176.0 150 64.7
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.4e-37 159.8 160 58.1
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 7.1e-37 157.5 149 59.1
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 4.6e-36 154.8 129 64.3
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 6.0e-36 154.5 130 63.8
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 2.3e-35 152.5 128 63.3
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 2.3e-35 152.5 128 63.3
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 2.3e-35 152.5 130 63.8
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 5.1e-35 151.4 130 63.8
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 1.5e-34 149.8 133 62.4
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 1.9e-34 149.4 130 63.1
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 1.9e-34 149.4 126 63.5
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 1.9e-34 149.4 126 63.5
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 2.4e-32 142.5 146 56.2
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 5.8e-31 137.9 128 60.2
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 4.9e-30 134.8 118 60.2
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 4.6e-28 128.3 113 61.1
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 1.8e-27 126.3 117 58.1
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.3e-27 125.9 120 58.3
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 6.3e-25 117.9 95 64.2
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 3.4e-23 112.1 78 69.2
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 1.3e-22 110.2 116 51.7
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 3.8e-22 108.6 109 56.9
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 5.0e-22 108.2 68 75.0
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 5.5e-21 104.8 67 74.6
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 7.2e-21 104.4 98 60.2
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 5.7e-18 94.7 62 69.4
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.4e-16 89.4 130 44.6
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.0e-11 73.9 49 69.4
Hma1.2p1_0435F.1_g152380 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 1.3e-09 67.0 37 83.8
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 1.7e-09 66.6 50 64.0
Hma1.2p1_0621F.1_g190810 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 4.8e-09 65.1 39 82.1
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 4.8e-09 65.1 40 72.5
CBR_g3174 Chara braunii HOM05D008490 ORTHO05D010725 7.0e-08 61.2 46 69.6
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 7.7e-07 57.8 49 57.1
Peaxi162Scf00000g58015 Petunia axillaris HOM05D008490 ORTHO05D010725 3.8e-06 55.5 73 50.7
arahy.Tifrunner.gnm1.ann1.38FWT1 Arachis hypogaea HOM05D008490 ORTHO05D010725 8.5e-06 54.3 77 48.1


User provided reference genes

Program Settings