Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.2e-89 331.3 160 100.0
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-86 322.8 160 97.5
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.3e-82 308.9 160 94.4
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.0e-79 300.1 160 91.2
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.2e-79 297.7 160 90.6
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.2e-79 297.7 160 90.6
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.2e-78 296.6 160 90.0
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-78 296.2 160 90.0
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.0e-78 295.8 160 89.4
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.2e-75 286.6 160 85.6
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-36 154.8 109 65.1
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 5.4e-36 154.8 109 65.1
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.1e-36 154.5 109 64.2
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-34 150.2 109 63.3
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 3.0e-34 149.1 109 63.3
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.7e-34 147.5 184 45.7
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.6e-22 109.4 135 41.5
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.7e-21 106.7 150 39.3
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.9e-21 105.9 139 38.8
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.9e-21 105.1 135 42.2
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.5e-20 102.8 109 47.7
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.5e-20 102.8 130 40.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 9.3e-20 100.9 133 39.1
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 4.6e-19 98.6 133 38.3
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 7.9e-19 97.8 133 38.3
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-18 97.1 108 45.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 7.4e-17 91.3 133 36.1
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.1e-16 89.7 139 36.0
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.4e-14 82.4 66 56.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 136 34.6
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 118 39.0
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-13 77.8 129 33.3
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.4e-12 77.0 60 61.7
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-12 76.3 136 33.8
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.3e-12 74.3 75 49.3
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-11 73.2 136 33.1
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 2.1e-11 73.2 76 47.4
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.5e-11 72.4 65 50.8
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-11 71.6 129 32.6
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.1e-11 71.6 67 49.3
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 137 32.1
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 70.5 133 32.3
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-10 69.3 133 33.1
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 3.0e-10 69.3 71 43.7
CSS0000617 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.9e-10 68.9 82 46.3
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 131 31.3
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 3.9e-10 68.9 130 33.8
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.9e-10 68.9 65 49.2
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.9e-10 68.9 68 47.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-10 68.6 132 32.6
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 139 33.1
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 70 45.7
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 6.7e-10 68.2 130 33.8
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 8.7e-10 67.8 71 49.3
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.4 136 31.6
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.1e-09 67.4 65 49.2
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 66.6 135 31.9
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-09 65.9 67 43.3
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.5 137 30.7
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.5 137 32.1
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 76 43.4
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 76 43.4
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 76 43.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 76 43.4
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 135 30.4
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 5.7e-09 65.1 67 44.8
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 5.7e-09 65.1 127 31.5
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 5.7e-09 65.1 127 31.5
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 7.4e-09 64.7 137 31.4
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 137 29.9
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 129 32.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-08 62.8 136 30.9
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-08 62.4 71 45.1
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-08 62.4 69 47.8
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-08 62.0 76 42.1
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 6.3e-08 61.6 67 49.3
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 69 46.4
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 69 47.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 113 32.7
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-08 61.2 71 43.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-07 60.1 133 30.1
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-07 60.1 74 44.6
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 137 29.9
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-07 59.7 132 30.3
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 5.3e-07 58.5 122 28.7
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 5.3e-07 58.5 143 25.9
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 58.5 113 33.6
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 5.3e-07 58.5 69 50.7
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.5e-06 57.0 79 36.7
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 2.0e-06 56.6 67 46.3
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.6e-06 56.2 80 37.5
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-06 56.2 134 26.9
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 55.8 69 43.5
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 55.1 68 42.6
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 55.1 74 39.2
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 5.9e-06 55.1 65 41.5
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 7.7e-06 54.7 83 36.1


User provided reference genes

Program Settings