Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.1e-187 659.8 348 100.0
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.6e-184 647.1 348 98.3
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.8e-124 449.9 327 73.1
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.7e-120 434.5 348 67.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 3.8e-119 432.2 334 68.3
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.7e-114 416.8 342 65.8
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.0e-112 409.8 338 66.6
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.5e-110 402.9 349 64.8
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 3.3e-110 402.5 337 62.9
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.6e-109 399.1 343 63.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 3.0e-108 396.0 342 61.7
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 8.9e-108 394.4 343 62.7
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.2e-107 394.0 343 62.4
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 3.7e-106 389.0 343 63.0
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.4e-105 387.1 332 63.6
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 3.2e-105 386.0 339 62.8
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 7.0e-105 384.8 343 61.8
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.2e-104 384.0 344 61.6
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 5.9e-104 381.7 340 59.7
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 7.8e-104 381.3 340 61.5
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 5.0e-103 378.6 333 62.8
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 8.9e-100 367.9 342 59.1
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.8e-99 365.2 364 56.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.9e-98 362.8 353 56.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 2.4e-97 359.8 337 58.8
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 7.0e-97 358.2 320 58.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 7.0e-97 358.2 339 59.3
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 4.6e-96 355.5 340 58.5
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 6.0e-96 355.1 337 58.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 6.0e-96 355.1 330 60.0
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 7.8e-96 354.8 333 61.6
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.3e-95 354.0 331 60.7
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 3.9e-95 352.4 338 58.3
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 3.9e-95 352.4 344 59.9
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.6e-94 348.6 338 59.5
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 5.6e-94 348.6 346 58.1
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.2e-93 347.4 346 57.8
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.6e-93 347.1 327 57.8
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.7e-93 345.5 340 56.8
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 8.1e-93 344.7 339 59.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 8.1e-93 344.7 346 56.9
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-92 344.4 337 57.6
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.8e-92 343.6 327 58.1
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 2.3e-92 343.2 338 58.9
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.2e-91 340.9 332 55.7
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.5e-91 340.5 343 58.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-91 340.5 442 47.1
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.6e-91 339.7 342 55.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.6e-91 339.7 338 58.6
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.5e-91 338.2 339 57.8
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 9.8e-91 337.8 336 56.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.7e-90 337.0 326 57.7
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.7e-90 337.0 276 66.3
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 4.9e-90 335.5 324 59.3
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 6.4e-90 335.1 345 55.4
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 8.3e-90 334.7 341 56.0
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.3e-90 334.7 338 58.0
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.1e-89 334.3 338 57.1
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.2e-89 332.8 337 56.4
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 5.4e-89 332.0 343 52.5
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 2.1e-88 330.1 340 54.7
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.7e-88 329.7 345 53.9
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 2.7e-88 329.7 341 57.2
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 7.8e-88 328.2 344 54.1
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.3e-87 326.6 341 53.4
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.3e-87 326.6 338 55.3
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.9e-87 325.9 325 56.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 8.6e-87 324.7 336 54.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 8.6e-87 324.7 336 54.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 3.3e-86 322.8 338 55.3
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.6e-85 320.5 341 54.5
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.8e-85 319.7 343 52.5
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.8e-85 319.7 341 55.4
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.4e-84 317.4 339 51.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.1e-84 316.2 343 52.8
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 6.8e-84 315.1 325 56.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 4.4e-83 312.4 332 54.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.2e-82 310.1 446 46.4
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.1e-81 307.8 330 52.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.4e-81 307.4 274 60.6
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.2e-81 306.2 328 53.4
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 5.4e-81 305.4 352 52.8
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 7.8e-80 301.6 327 53.2
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.5e-78 296.6 336 49.7
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.8e-77 293.1 338 49.4
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.8e-77 293.1 379 50.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 4.7e-77 292.4 341 51.0
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 5.8e-75 285.4 331 51.7
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.4e-73 280.8 340 49.7
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.5e-70 270.8 296 53.7
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 7.3e-70 268.5 339 49.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 2.9e-66 256.5 341 46.6
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.1e-61 240.4 268 52.6
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.8e-61 240.0 235 58.3
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.8e-60 237.3 388 38.4
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 3.1e-52 209.9 182 59.9
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.7e-46 189.1 137 72.3
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 4.1e-44 183.0 207 52.2
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.5e-41 173.7 373 33.5
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 3.2e-41 173.3 307 40.1
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 7.2e-41 172.2 359 35.1
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.2e-40 171.4 137 63.5
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.3e-29 132.5 95 71.6
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.2e-25 120.2 83 74.7
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 4.7e-24 116.3 221 34.8
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 5.7e-22 109.4 469 24.9
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.8e-21 107.1 189 40.2
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.0e-19 100.9 82 64.6
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 2.6e-19 100.5 124 49.2
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.0e-18 98.6 251 29.9
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.0e-18 98.6 125 46.4
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.9e-18 97.1 67 70.1
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.7e-14 82.0 268 28.4
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 8.2e-13 79.0 189 30.7
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-12 78.6 54 70.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 5.3e-12 76.3 81 53.1
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.3e-12 76.3 60 65.0
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-09 68.2 57 57.9
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.2e-09 67.0 133 36.8
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 3.6e-08 63.5 129 34.9


User provided reference genes

Program Settings