Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 8.6e-72 273.5 131 100.0
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 1.9e-50 202.6 136 76.5
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 2.1e-49 199.1 131 77.9
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 2.5e-47 192.2 131 76.3
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 4.3e-47 191.4 131 76.3
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 4.4e-44 181.4 131 71.0
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 6.6e-32 141.0 117 62.4
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 1.9e-18 96.3 89 58.4
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 6.0e-17 91.3 59 72.9
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 6.7e-16 87.8 138 43.5
A05p22320 Brassica napus HOM05D012847 ORTHO05D020225 5.7e-15 84.7 47 78.7
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 3.7e-14 82.0 111 47.7
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 6.3e-14 81.3 107 48.6
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 8.2e-14 80.9 138 40.6
BcaC08g42807 Brassica carinata HOM05D012847 ORTHO05D014920 1.4e-13 80.1 60 61.7
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 3.1e-13 79.0 110 48.2
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 5.3e-13 78.2 66 63.6
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 6.9e-13 77.8 79 50.6
A05p22380 Brassica napus HOM05D000920 ORTHO05D010211 9.0e-13 77.4 46 73.9
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-12 76.6 92 45.7
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 2.6e-12 75.9 47 72.3
EL10As7g23717 Beta vulgaris HOM05D012847 ORTHO05D014920 7.6e-12 74.3 40 80.0
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 1.7e-11 73.2 157 39.5
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 1.1e-10 70.5 144 37.5
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-10 70.1 47 66.0
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 3.2e-10 68.9 71 53.5
Zm00001eb262330 Zea mays HOM05D010106 ORTHO05D000626 3.5e-09 65.5 70 51.4
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 4.6e-09 65.1 111 43.2
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 4.6e-09 65.1 60 60.0
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 7.9e-09 64.3 80 48.8
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 1.3e-08 63.5 106 39.6
Zm00001eb263490 Zea mays HOM05D010106 ORTHO05D014920 1.3e-08 63.5 70 50.0
CBR_g51345 Chara braunii HOM05D010423 ORTHO05D010128 3.9e-08 62.0 71 50.7
Sopen00g004830 Solanum pennellii HOM05D031495 ORTHO05D014920 3.9e-08 62.0 37 75.7
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 8.7e-08 60.8 102 40.2
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 8.7e-08 60.8 102 40.2
Zm00001eb264030 Zea mays HOM05D001018 ORTHO05D000626 3.3e-07 58.9 37 70.3
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 5.7e-07 58.2 98 41.8
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 9.7e-07 57.4 72 48.6
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 1.3e-06 57.0 34 79.4
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 2.8e-06 55.8 33 81.8
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 2.8e-06 55.8 33 81.8
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 2.8e-06 55.8 83 43.4
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 2.8e-06 55.8 83 43.4
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-06 54.3 78 48.7
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 8.2e-06 54.3 30 86.7
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 8.2e-06 54.3 30 86.7


User provided reference genes

Program Settings