Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 4.9e-131 471.1 230 100.0
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.2e-130 468.4 230 99.1
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 5.9e-108 394.4 230 83.0
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 9.4e-106 387.1 212 86.3
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 1.2e-105 386.7 233 83.3
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.3e-104 382.5 230 80.4
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 6.7e-104 380.9 230 80.4
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 6.7e-104 380.9 224 81.2
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 8.8e-104 380.6 217 84.8
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.1e-103 380.2 223 81.6
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 2.5e-103 379.0 212 84.9
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 2.5e-103 379.0 212 84.9
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 5.7e-103 377.9 214 83.6
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 7.4e-103 377.5 223 81.6
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 9.7e-103 377.1 213 85.0
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.3e-102 376.7 212 84.4
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.3e-102 376.7 222 81.5
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 1.7e-102 376.3 217 83.4
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 1.7e-102 376.3 221 80.1
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.2e-102 375.9 223 81.2
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 2.2e-102 375.9 223 80.7
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 3.7e-102 375.2 213 84.0
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 3.7e-102 375.2 223 78.0
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 3.7e-102 375.2 211 82.0
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 4.8e-102 374.8 230 81.3
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 4.8e-102 374.8 216 80.1
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 6.3e-102 374.4 217 80.2
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 1.4e-101 373.2 223 80.7
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 3.1e-101 372.1 200 85.5
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 1.2e-100 370.2 202 84.2
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 1.5e-100 369.8 230 77.4
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.5e-100 369.8 214 83.2
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.5e-100 369.8 224 79.9
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 5.9e-100 367.9 220 80.5
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.0e-99 367.1 223 79.8
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 1.7e-99 366.3 230 75.7
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 1.7e-99 366.3 217 80.2
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 1.7e-99 366.3 214 81.3
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.7e-99 366.3 223 79.8
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 2.2e-99 365.9 214 81.3
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 2.9e-99 365.5 243 74.5
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 3.8e-99 365.2 230 77.4
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 5.0e-99 364.8 207 82.6
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.1e-98 363.6 204 85.8
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.1e-98 363.6 205 82.0
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 1.9e-98 362.8 224 79.0
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.9e-98 362.8 221 80.1
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 4.2e-98 361.7 222 76.1
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 5.5e-98 361.3 230 75.7
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 7.2e-98 360.9 221 77.4
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.2e-97 360.1 214 77.1
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 2.1e-97 359.4 212 79.7
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 2.7e-97 359.0 207 81.6
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 6.1e-97 357.8 212 77.4
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.4e-96 356.7 207 78.7
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 1.4e-96 356.7 212 78.3
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 8.8e-96 354.0 208 79.3
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.1e-95 353.6 234 77.4
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 1.5e-95 353.2 214 77.6
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 2.0e-95 352.8 214 77.1
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 2.2e-94 349.4 224 74.6
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 1.8e-93 346.3 214 75.7
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 4.1e-93 345.1 219 75.3
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 7.0e-93 344.4 208 77.4
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 2.6e-92 342.4 221 71.5
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 6.5e-91 337.8 212 73.1
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 8.5e-91 337.4 218 74.8
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 1.1e-90 337.0 219 74.0
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 1.1e-90 337.0 219 74.0
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.1e-90 337.0 217 75.1
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 1.4e-90 336.7 219 74.0
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 1.9e-90 336.3 211 76.3
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 7.2e-90 334.3 219 73.1
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 1.6e-89 333.2 200 78.0
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.7e-89 332.4 200 77.5
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 1.4e-88 330.1 212 72.2
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 1.8e-88 329.7 222 72.5
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 1.8e-88 329.7 222 72.5
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 1.5e-87 326.6 263 63.9
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.0e-87 326.2 222 68.5
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 2.6e-87 325.9 178 85.4
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 1.3e-83 313.5 189 78.3
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 1.9e-82 309.7 183 75.4
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 1.9e-82 309.7 178 80.3
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 1.7e-78 296.6 190 71.6
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 1.8e-77 293.1 208 69.2
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 2.4e-77 292.7 180 76.1
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 2.1e-73 279.6 146 84.9
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 7.5e-71 271.2 230 64.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 1.3e-70 270.4 221 57.9
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.7e-70 270.0 169 76.3
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.9e-66 256.5 227 62.1
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 7.2e-66 254.6 191 58.1
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 1.4e-64 250.4 211 59.7
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.3e-62 243.8 140 80.0
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 5.9e-60 235.0 216 51.4
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 9.5e-58 227.6 130 80.0
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.4e-56 223.8 137 73.7
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 2.3e-48 196.4 115 79.1
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 2.0e-47 193.4 126 71.4
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.4e-45 187.2 103 81.6
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 4.1e-45 185.7 153 53.6
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 2.6e-39 166.4 205 39.0
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 6.0e-36 155.2 128 62.5
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 5.1e-35 152.1 128 60.2
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.1e-32 144.4 196 33.7
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 9.9e-31 137.9 81 75.3
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 7.1e-29 131.7 76 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 6.0e-28 128.6 105 55.2
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 2.3e-27 126.7 173 34.1
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.6e-25 120.6 74 74.3
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 2.2e-22 110.2 73 61.6
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 6.0e-20 102.1 59 78.0
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 7.8e-20 101.7 51 86.3
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 1.1e-16 91.3 71 60.6
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 5.1e-11 72.4 58 69.0
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 8.7e-11 71.6 60 61.7
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 1.3e-09 67.8 92 45.7


User provided reference genes

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