Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002150 Camellia sinensis var. sinensis HOM05D004698 ORTHO05D005699 5.3e-75 284.3 143 100.0
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 9.1e-51 203.8 114 88.6
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 4.5e-50 201.4 119 83.2
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 7.7e-50 200.7 107 92.5
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 1.0e-49 200.3 107 86.9
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 3.8e-49 198.4 107 87.9
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 6.5e-49 197.6 103 91.3
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 1.9e-48 196.1 127 77.2
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 1.9e-48 196.1 107 88.8
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.9e-48 196.1 107 88.8
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.9e-48 196.1 107 88.8
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 1.9e-48 196.1 107 88.8
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 2.5e-48 195.7 107 85.0
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 2.5e-48 195.7 107 85.0
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.2e-48 194.9 107 87.9
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 5.5e-48 194.5 107 86.0
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.6e-47 193.0 107 86.9
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.6e-47 193.0 107 86.9
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 2.1e-47 192.6 107 86.0
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 85.0
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 86.0
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 84.1
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 83.2
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 86.9
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 2.7e-47 192.2 107 83.2
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 3.6e-47 191.8 107 84.1
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 3.6e-47 191.8 108 86.1
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 4.7e-47 191.4 107 84.1
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 4.7e-47 191.4 107 83.2
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 4.7e-47 191.4 107 86.9
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 6.1e-47 191.0 107 83.2
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 6.1e-47 191.0 107 85.0
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 6.1e-47 191.0 107 82.2
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 6.1e-47 191.0 107 86.0
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 8.0e-47 190.7 107 85.0
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 8.0e-47 190.7 107 84.1
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 8.0e-47 190.7 107 84.1
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 1.0e-46 190.3 107 84.1
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 1.0e-46 190.3 107 82.2
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 1.4e-46 189.9 107 84.1
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 1.4e-46 189.9 107 85.0
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.8e-46 189.5 109 83.5
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 2.3e-46 189.1 106 85.8
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 2.3e-46 189.1 120 73.3
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 2.3e-46 189.1 107 85.0
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 3.0e-46 188.7 111 81.1
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 4.0e-46 188.3 107 81.3
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 4.0e-46 188.3 107 81.3
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 4.0e-46 188.3 107 84.1
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 4.0e-46 188.3 107 84.1
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 4.0e-46 188.3 107 82.2
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 8.8e-46 187.2 108 80.6
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 1.5e-45 186.4 107 80.4
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 2.0e-45 186.0 107 81.3
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 2.0e-45 186.0 107 78.5
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 3.4e-45 185.3 107 81.3
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 3.4e-45 185.3 107 82.2
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 4.4e-45 184.9 107 82.2
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 4.4e-45 184.9 107 80.4
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 7.5e-45 184.1 107 83.2
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 7.5e-45 184.1 107 83.2
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 7.5e-45 184.1 112 77.7
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 9.8e-45 183.7 107 81.3
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 9.8e-45 183.7 107 81.3
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 9.8e-45 183.7 107 80.4
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 9.8e-45 183.7 96 89.6
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 9.8e-45 183.7 107 82.2
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 9.8e-45 183.7 107 82.2
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 1.3e-44 183.3 107 83.2
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 1.3e-44 183.3 107 83.2
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 1.3e-44 183.3 107 81.3
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 2.2e-44 182.6 107 84.1
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 2.2e-44 182.6 107 81.3
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.2e-44 182.6 107 79.4
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 2.2e-44 182.6 107 81.3
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 2.8e-44 182.2 107 80.4
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 2.8e-44 182.2 107 79.4
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 3.7e-44 181.8 106 82.1
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 3.7e-44 181.8 107 78.5
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 4.8e-44 181.4 107 81.3
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 4.8e-44 181.4 107 81.3
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 4.8e-44 181.4 107 77.6
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 6.3e-44 181.0 107 80.4
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 6.3e-44 181.0 107 79.4
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 6.3e-44 181.0 107 78.5
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 8.3e-44 180.6 107 78.5
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 8.3e-44 180.6 107 75.7
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 1.1e-43 180.3 107 81.3
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 1.1e-43 180.3 96 88.5
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 1.1e-43 180.3 107 79.4
A02p05700 Brassica napus HOM05D004698 ORTHO05D005699 1.4e-43 179.9 107 79.4
BraA02t05522Z Brassica rapa HOM05D004698 ORTHO05D005699 1.4e-43 179.9 107 79.4
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.4e-43 179.9 107 78.5
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.4e-43 179.9 107 78.5
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 1.8e-43 179.5 107 80.4
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 1.8e-43 179.5 107 80.4
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 1.8e-43 179.5 107 81.3
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 1.8e-43 179.5 107 80.4
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 2.4e-43 179.1 107 80.4
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.4e-43 179.1 107 74.8
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 3.1e-43 178.7 107 79.4
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 3.1e-43 178.7 140 65.7
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 4.1e-43 178.3 107 75.7
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 4.1e-43 178.3 107 74.8
Cpa.g.sc117.1 Carica papaya HOM05D004698 ORTHO05D005699 5.4e-43 177.9 101 81.2
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 5.4e-43 177.9 96 86.5
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 5.4e-43 177.9 107 78.5
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 5.4e-43 177.9 107 78.5
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 7.0e-43 177.6 107 75.7
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 7.0e-43 177.6 107 75.7
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 9.1e-43 177.2 107 80.4
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.2e-42 176.8 107 80.4
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.0e-42 176.0 107 79.4
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 2.7e-42 175.6 96 86.5
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 1.7e-41 172.9 96 80.2
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 2.3e-41 172.6 107 73.8
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 2.3e-41 172.6 107 77.6
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 5.0e-41 171.4 108 71.3
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 1.5e-40 169.9 94 83.0
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.9e-40 169.5 116 68.1
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 3.3e-40 168.7 107 75.7
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 3.3e-40 168.7 107 75.7
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 4.2e-40 168.3 110 73.6
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 4.2e-40 168.3 107 75.7
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 5.5e-40 167.9 101 79.2
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 9.5e-40 167.2 107 74.8
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.2e-39 166.8 108 72.2
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 1.6e-39 166.4 94 81.9
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 4.7e-39 164.9 107 72.0
MD03G1017600 Malus domestica HOM05D004698 ORTHO05D005699 6.1e-39 164.5 95 81.1
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 6.8e-38 161.0 107 72.0
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 7.0e-35 151.0 107 66.4
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 1.2e-34 150.2 85 81.2
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 7.0e-27 124.4 107 60.7
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 1.8e-22 109.8 61 86.9
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 7.5e-21 104.4 63 81.0
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 1.7e-17 93.2 109 39.4
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 1.1e-11 73.9 52 65.4
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 7.8e-10 67.8 39 76.9


User provided reference genes

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