Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.5e-61 238.0 114 100.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.0e-52 208.4 114 86.8
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-51 206.1 114 88.6
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-49 199.5 114 85.1
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.3e-47 190.3 114 82.5
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.4e-46 188.7 114 79.8
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.2e-46 186.8 114 77.2
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.2e-46 186.8 118 79.7
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.8e-45 183.7 116 80.2
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.0e-33 144.8 109 61.5
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.2e-33 144.4 112 60.7
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.2e-33 144.4 109 61.5
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-31 139.8 112 59.8
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-30 136.7 112 58.9
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.4e-30 134.4 111 60.4
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.5e-29 131.7 112 54.5
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-27 126.7 109 56.9
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 1.9e-27 125.9 114 57.0
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.9e-27 125.9 109 58.7
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.3e-27 125.2 109 58.7
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.1e-26 120.6 106 56.6
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 4.4e-24 114.8 98 57.1
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 7.6e-24 114.0 92 60.9
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 6.4e-23 110.9 109 45.9
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 1.9e-22 109.4 110 50.0
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.9e-22 109.4 110 50.0
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.2e-22 108.6 109 53.2
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 9.3e-22 107.1 94 56.4
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 1.2e-21 106.7 109 50.5
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.2e-21 106.7 109 49.5
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 1.2e-21 106.7 100 53.0
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 4.6e-21 104.8 95 54.7
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 6.0e-21 104.4 109 49.5
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.9e-20 101.7 114 43.9
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 3.9e-20 101.7 114 43.9
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-20 101.3 109 49.5
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 8.7e-20 100.5 109 48.6
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 3.3e-19 98.6 113 46.0
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 7.3e-19 97.4 94 50.0
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-18 96.3 93 49.5
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-18 96.3 107 42.1
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 2.8e-18 95.5 104 45.2
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.8e-18 95.5 109 42.2
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 6.2e-18 94.4 97 46.4
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 1.4e-17 93.2 105 43.8
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 5.3e-17 91.3 110 38.2
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.6e-16 89.0 94 45.7
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 5.8e-16 87.8 68 60.3
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 9.9e-16 87.0 95 46.3
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 9.9e-16 87.0 95 46.3
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.9e-16 87.0 111 36.0
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-14 83.6 109 45.0
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 2.4e-14 82.4 97 47.4
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-14 82.0 91 39.6
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.2e-14 81.6 86 48.8
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 7.1e-14 80.9 105 39.0
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 3.5e-13 78.6 68 55.9
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 7.9e-13 77.4 97 43.3
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-12 77.0 108 36.1
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 3.9e-12 75.1 93 41.9
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.9e-12 75.1 91 42.9
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-12 74.7 108 35.2
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-12 74.7 108 35.2
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.1e-11 73.6 57 59.6
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.9e-11 72.8 108 31.5
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.3e-11 71.6 93 40.9
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 5.6e-11 71.2 94 40.4
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 7.4e-11 70.9 98 36.7
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.6e-10 69.7 90 42.2
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-10 69.7 90 40.0
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.6e-10 69.7 99 39.4
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 1.6e-10 69.7 99 39.4
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.1e-10 69.3 93 41.9
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-10 69.3 94 40.4
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 6.2e-10 67.8 102 36.3
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 6.2e-10 67.8 102 36.3
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.1e-10 67.4 99 38.4
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.1e-09 67.0 58 58.6
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.1e-09 67.0 90 42.2
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 1.4e-09 66.6 91 44.0
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 1.4e-09 66.6 56 58.9
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 3.1e-09 65.5 69 49.3
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.1e-09 65.5 108 33.3
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.0e-09 65.1 69 50.7
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 5.3e-09 64.7 97 36.1
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 5.3e-09 64.7 97 36.1
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 5.3e-09 64.7 93 37.6
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.3e-09 64.7 93 38.7
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 6.9e-09 64.3 97 36.1
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.9e-09 64.3 93 39.8
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 9.0e-09 63.9 94 41.5
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.0e-09 63.9 99 39.4
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.2e-08 63.5 58 55.2
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 1.5e-08 63.2 55 58.2
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-08 63.2 90 37.8
TWI81G0284 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.5e-08 63.2 80 43.8
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 2.0e-08 62.8 54 53.7
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-08 62.4 113 34.5
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.4e-08 62.0 113 33.6
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.5e-08 61.6 113 34.5
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 4.5e-08 61.6 114 35.1
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 7.6e-08 60.8 125 34.4
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.3e-07 60.1 92 32.6
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-07 60.1 59 45.8
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 2.2e-07 59.3 95 36.8
PSO729G0017 Papaver somniferum HOM05D013875 ORTHO05D002268 2.2e-07 59.3 93 35.5
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.8e-07 58.5 114 34.2
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.9e-07 58.2 113 33.6
TWI36G1263 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 4.9e-07 58.2 74 33.8
TWI59G1088 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.9e-07 58.2 86 32.6
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 8.4e-07 57.4 124 37.1
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 8.4e-07 57.4 86 44.2
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.4e-07 57.4 67 46.3
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.1e-06 57.0 86 44.2
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.4e-06 56.6 93 33.3
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 1.4e-06 56.6 56 50.0
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 2.4e-06 55.8 109 28.4
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 2.4e-06 55.8 109 28.4
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 2.4e-06 55.8 109 28.4
TWI81G0336 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.2e-06 55.5 80 40.0
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.2e-06 55.1 113 33.6
TWI59G1113 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.2e-06 55.1 49 53.1
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 7.1e-06 54.3 91 34.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 7.1e-06 54.3 91 34.1
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-06 54.3 60 50.0
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 9.3e-06 53.9 95 32.6


User provided reference genes

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