Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 2.3e-110 404.1 702 100.0
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 2.4e-67 261.2 713 87.2
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 8.4e-65 252.7 712 87.4
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.3e-52 212.2 654 91.1
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.0e-50 204.9 187 61.5
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 4.6e-47 193.7 128 77.3
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.0e-46 192.6 664 86.4
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 1.8e-46 191.8 176 63.1
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 5.1e-46 190.3 691 85.8
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 8.7e-46 189.5 667 84.4
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 5.7e-45 186.8 666 87.7
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 7.4e-45 186.4 718 76.2
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 1.6e-44 185.3 681 86.2
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.5e-42 178.7 148 66.9
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 4.5e-42 177.2 718 81.1
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 5.9e-42 176.8 137 68.6
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 1.3e-41 175.6 653 86.8
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 2.9e-41 174.5 652 88.2
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 5.0e-41 173.7 136 67.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 6.5e-41 173.3 652 84.8
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.4e-40 172.2 659 85.6
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 1.9e-40 171.8 136 67.6
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.9e-40 171.8 136 67.6
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 4.2e-40 170.6 135 68.9
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 4.2e-40 170.6 135 68.9
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 7.2e-40 169.9 705 77.3
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 7.2e-40 169.9 185 55.1
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 9.4e-40 169.5 115 77.4
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 1.6e-39 168.7 135 67.4
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 1.4e-38 165.6 181 52.5
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 5.1e-38 163.7 153 56.9
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 5.1e-38 163.7 690 76.2
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 6.7e-38 163.3 709 82.5
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.5e-37 162.2 690 76.2
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 9.7e-37 159.5 130 67.7
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 1.3e-36 159.1 131 66.4
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.2e-36 158.3 135 65.9
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 2.8e-36 157.9 165 53.9
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 6.3e-36 156.8 165 53.9
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 8.2e-36 156.4 187 54.0
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.8e-35 155.2 693 74.9
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.8e-35 155.2 693 68.7
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 2.4e-35 154.8 140 61.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.4e-35 154.8 189 52.9
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 4.1e-35 154.1 130 64.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 4.1e-35 154.1 140 63.6
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 6.9e-35 153.3 138 59.4
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 6.9e-35 153.3 692 81.9
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 9.1e-35 152.9 151 57.6
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 9.1e-35 152.9 148 58.8
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 9.1e-35 152.9 135 62.2
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 9.1e-35 152.9 155 56.8
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.2e-34 152.5 692 79.9
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.2e-34 152.5 692 79.9
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.5e-34 152.1 156 55.1
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.5e-34 152.1 147 57.1
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 3.4e-34 151.0 151 56.3
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 3.4e-34 151.0 151 56.3
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.4e-34 151.0 136 58.8
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 4.5e-34 150.6 151 56.3
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 4.5e-34 150.6 151 56.3
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 5.9e-34 150.2 151 56.3
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.9e-34 150.2 116 67.2
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.9e-34 150.2 116 67.2
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 5.9e-34 150.2 703 69.1
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 7.7e-34 149.8 136 61.8
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.0e-33 149.4 165 55.8
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 1.3e-33 149.1 187 47.6
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.2e-33 148.3 129 62.8
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.2e-33 148.3 124 62.1
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 6.5e-33 146.7 170 52.4
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 6.5e-33 146.7 136 58.8
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.4e-32 145.6 164 53.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 3.2e-32 144.4 111 67.6
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 5.5e-32 143.7 113 64.6
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 5.5e-32 143.7 656 82.3
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.2e-31 142.5 104 71.2
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 3.0e-30 137.9 121 60.3
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 6.7e-30 136.7 179 49.7
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 8.8e-30 136.3 118 61.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.6e-29 134.8 132 54.5
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.3e-28 132.5 149 55.0
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 3.7e-28 131.0 115 60.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 8.2e-28 129.8 90 77.8
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 2.4e-27 128.3 138 51.4
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 9.1e-27 126.3 103 64.1
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.2e-26 125.9 85 68.2
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 2.6e-26 124.8 124 54.0
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 7.7e-26 123.2 109 61.5
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.1e-24 119.4 133 55.6
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.1e-24 119.4 172 46.5
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.9e-24 118.6 83 66.3
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 5.5e-24 117.1 128 50.0
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.6e-23 115.5 132 51.5
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 2.7e-23 114.8 82 67.1
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 1.8e-22 112.1 183 42.1
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.8e-22 112.1 104 56.7
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.0e-22 111.3 131 49.6
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 6.7e-22 110.2 131 48.9
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.6e-21 108.2 99 56.6
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 7.4e-21 106.7 77 67.5
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.7e-20 104.4 75 70.7
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.6e-18 99.0 75 68.0
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.4e-14 85.9 60 65.0
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.0e-13 82.0 84 46.4
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 3.4e-13 81.3 61 67.2
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 2.2e-12 78.6 58 67.2
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 1.1e-11 76.3 79 53.2
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 1.1e-11 76.3 79 53.2
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 4.1e-11 74.3 69 56.5
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.6e-10 72.4 50 70.0
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 3.5e-10 71.2 133 34.6
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 3.5e-10 71.2 133 34.6
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 2.9e-09 68.2 92 40.2


User provided reference genes

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