Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 8.3e-263 909.8 460 100.0
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.7e-186 656.4 466 73.0
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 6.3e-178 627.9 454 70.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 5.9e-176 621.3 438 68.5
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.6e-171 605.9 438 66.4
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 2.6e-171 605.9 456 68.0
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 9.7e-171 604.0 436 67.0
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.9e-166 589.7 461 63.8
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.2e-166 589.0 436 67.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.4e-163 578.9 458 64.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.5e-160 568.9 437 63.4
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.2e-159 566.2 437 62.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.9e-158 563.1 432 62.5
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 4.2e-158 562.0 439 64.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 4.2e-158 562.0 438 63.2
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 4.2e-158 562.0 435 63.0
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.6e-157 560.1 426 62.9
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 4.7e-157 558.5 437 62.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.7e-157 558.5 419 64.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.0e-156 555.8 437 65.4
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-156 555.1 437 62.2
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-156 555.1 437 62.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.6e-155 552.7 439 63.8
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.7e-154 550.1 438 61.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.0e-151 540.8 457 60.0
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.3e-151 540.4 439 59.7
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.9e-151 539.3 429 62.5
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 3.8e-151 538.9 432 62.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 5.0e-151 538.5 439 59.0
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 6.6e-151 538.1 438 60.0
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.6e-151 538.1 432 60.2
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 7.3e-150 534.6 437 59.0
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 2.8e-149 532.7 438 60.0
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.7e-149 531.9 431 59.9
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 4.0e-148 528.9 428 60.0
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.4e-147 525.4 432 60.0
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 4.4e-147 525.4 432 58.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.7e-146 522.3 439 58.1
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.1e-145 520.8 436 58.7
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.5e-144 515.8 439 58.5
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 3.5e-144 515.8 458 58.7
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 7.8e-144 514.6 452 57.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.0e-143 514.2 459 57.5
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 2.3e-143 513.1 438 57.5
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 2.3e-143 513.1 456 59.9
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 3.9e-143 512.3 438 56.8
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 6.6e-143 511.5 433 57.5
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.5e-142 507.7 438 58.2
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.2e-141 507.3 435 57.5
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.8e-141 506.1 428 57.9
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.7e-141 505.4 438 58.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 8.0e-141 504.6 427 59.3
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 3.1e-140 502.7 428 58.6
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.2e-140 501.9 438 57.8
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.5e-139 500.4 428 57.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 7.5e-139 498.0 438 58.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.7e-138 496.9 428 55.6
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 1.4e-137 493.8 438 56.6
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.0e-136 490.0 438 55.5
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.7e-136 489.6 438 55.9
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 3.5e-136 489.2 433 55.4
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 1.5e-134 483.8 423 57.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.9e-134 483.4 439 54.2
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 2.5e-134 483.0 438 55.3
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 5.6e-134 481.9 431 56.6
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 7.3e-134 481.5 426 56.8
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 9.5e-134 481.1 435 55.2
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.2e-133 480.7 435 54.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 6.2e-133 478.4 436 55.0
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.1e-132 477.6 440 54.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.4e-132 477.2 424 56.6
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 3.1e-132 476.1 423 55.3
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 4.0e-132 475.7 457 52.7
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-131 474.2 431 56.6
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.7e-130 470.3 438 55.9
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.2e-130 469.9 439 52.8
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.2e-130 469.9 425 55.5
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.9e-130 469.5 429 55.9
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 1.1e-129 467.6 436 55.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.9e-129 466.8 438 54.6
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.4e-129 466.5 345 65.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 5.4e-129 465.3 433 55.0
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 8.6e-127 458.0 417 54.4
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.1e-126 457.6 441 53.5
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-124 451.1 438 52.1
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-124 451.1 438 52.1
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 5.2e-124 448.7 437 52.2
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.5e-123 447.2 438 52.7
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 4.4e-123 445.7 440 51.6
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 7.1e-121 438.3 415 55.9
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.7e-119 433.7 310 66.1
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 6.6e-119 431.8 445 51.9
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.9e-118 430.3 436 48.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 7.3e-118 428.3 437 49.4
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.1e-117 426.8 323 63.5
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 6.2e-117 425.2 393 56.5
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.4e-115 419.5 426 50.2
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 6.6e-111 405.2 462 48.7
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.3e-100 369.0 270 66.7
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 3.4e-99 366.3 418 46.7
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.9e-98 363.2 336 53.9
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 7.1e-89 332.0 267 64.0
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 3.4e-75 286.6 197 69.0
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 3.4e-75 286.6 197 69.0
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.0e-71 273.5 263 51.3
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.3e-66 258.1 220 58.6
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.2e-66 257.3 425 34.1
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.0e-59 234.2 428 33.6
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.6e-59 233.8 401 33.4
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 5.0e-58 229.6 160 64.4
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.4e-52 211.5 453 32.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 5.0e-42 176.4 395 29.9
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.2e-30 138.7 174 42.0
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 3.4e-30 137.1 115 57.4
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 3.4e-30 137.1 115 57.4
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.3e-29 135.2 116 56.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.3e-29 135.2 117 59.8
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.4e-28 131.0 116 54.3
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.7e-26 124.8 143 46.9
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.6e-25 119.8 143 45.5
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 9.2e-20 102.4 123 42.3
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 7.3e-17 92.8 127 44.9
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 5.2e-15 86.7 224 28.1


User provided reference genes

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