Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002123 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.1e-64 248.8 123 100.0
CSS0032761 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.2e-59 233.0 123 95.1
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.6e-56 221.5 123 91.1
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.9e-36 156.0 94 86.2
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.3e-32 143.3 94 79.8
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.2e-29 132.5 77 87.0
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.4e-29 130.6 94 75.5
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.5e-28 127.9 94 71.3
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.1e-28 127.5 93 74.2
CSS0039150 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.1e-23 112.1 94 66.0
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 2.8e-16 89.0 94 52.1
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 1.4e-15 86.7 94 51.1
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 5.9e-14 81.3 115 47.0
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 7.2e-12 74.3 105 44.8
CSS0029313 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.4e-12 73.9 82 53.7
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 1.2e-11 73.6 83 49.4
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.7e-11 71.6 113 45.1
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 4.4e-09 65.1 125 35.2
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 1.3e-08 63.5 75 52.0
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 6.3e-08 61.2 101 38.6
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 6.3e-08 61.2 101 38.6
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 1.4e-07 60.1 86 41.9
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 1.4e-07 60.1 90 40.0
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 5.3e-07 58.2 84 40.5
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 9.1e-07 57.4 83 41.0


User provided reference genes

Program Settings